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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 266.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 494.9
Min RPKM: 39.3
Std RPKM: 92.0
Median RPKM: 205.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
494.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
487.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
487.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
460.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
439.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
378.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
364.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
348.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
341.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
337.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
332.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
331.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
330.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
328.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
327.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
327.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
325.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
318.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
300.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
300.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
296.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
293.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
290.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
288.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
286.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
285.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
283.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
275.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
272.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
264.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
264.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
262.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
260.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
256.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
253.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
250.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
249.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
248.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
248.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
246.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
245.7
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
244.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
241.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
241.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
240.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
237.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
236.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
235.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
226.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
226.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
224.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
220.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
214.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
213.5
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
211.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
211.5
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
207.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
204.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
204.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
203.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
202.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
201.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
198.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
191.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
187.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
187.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
186.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
185.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
184.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
177.9
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
176.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
175.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
175.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
169.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
169.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
169.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
168.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
167.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
167.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
166.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
166.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
165.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
165.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
163.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
161.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
158.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
157.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
157.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
156.6
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
148.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
147.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
147.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
145.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
142.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
136.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
134.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
129.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
127.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
124.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
121.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
114.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
112.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
111.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
110.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
105.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
104.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
100.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
89.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
84.6
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
82.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
77.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
67.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
62.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
39.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 200.1
Samples: 108
Max RPKM: 697.7
Min RPKM: 46.4
Std RPKM: 104.0
Median RPKM: 179.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
697.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
488.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
431.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
429.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
391.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
372.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
364.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
360.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
357.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
356.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
335.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
333.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
333.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
318.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
315.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
314.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
312.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
306.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
300.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
296.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
283.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
278.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
259.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
256.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
254.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
253.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
252.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
250.2
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
242.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
240.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
235.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
233.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
227.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
227.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
225.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
223.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
223.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
220.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
210.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
208.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
206.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
205.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
205.3
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
204.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
201.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
200.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
197.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
191.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
190.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
186.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
185.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
184.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
183.8
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
179.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
179.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
178.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
175.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
175.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
172.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
171.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
168.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
164.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
161.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
160.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
158.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
151.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
150.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
150.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
149.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
143.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
140.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
138.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
136.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
135.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
135.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
134.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
133.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
133.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
132.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
131.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
128.7
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
128.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
126.4
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
124.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
122.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
121.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
120.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
117.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
115.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
111.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
110.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
109.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
108.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
105.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
90.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
89.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
89.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
87.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
87.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
85.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
83.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
78.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
70.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
66.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
62.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
59.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
51.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
46.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.