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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 520.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 248.4
Min RPKM: 32.0
Std RPKM: 44.5
Median RPKM: 126.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
248.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
211.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
200.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
200.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
199.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
193.6
GTEX-WL46-2926-SM-3LK82
50-59 years, male
187.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
185.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
184.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
184.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
176.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
176.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
174.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
173.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
172.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
171.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
171.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
168.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
167.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
167.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
166.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
165.4
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
164.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
162.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
160.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
160.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
158.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
155.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
154.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
153.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
153.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
152.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
151.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
150.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
150.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
148.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
148.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
147.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
147.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
147.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
145.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
144.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
143.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
140.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
140.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
139.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
138.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
136.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
136.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
135.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
134.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
134.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
129.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
128.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
127.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
126.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
126.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
126.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
125.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
124.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
124.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
122.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
122.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
121.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
120.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
120.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
119.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
118.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
115.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
114.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
114.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
114.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
113.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
111.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
110.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
110.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
110.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
103.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
101.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
100.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
99.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
97.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
96.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
88.5
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
86.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
85.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
84.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
79.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
78.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
77.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
76.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
74.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
74.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
72.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
70.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
67.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
67.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
67.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
67.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
65.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
64.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
62.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
61.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
60.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
60.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
58.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
58.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
54.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
52.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
50.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
43.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
35.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
35.0
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
32.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 155.2
Samples: 108
Max RPKM: 273.3
Min RPKM: 24.3
Std RPKM: 64.5
Median RPKM: 166.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
273.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
272.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
265.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
263.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
262.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
247.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
244.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
242.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
241.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
240.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
233.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
232.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
231.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
222.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
221.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
217.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
215.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
214.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
214.2
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
213.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
212.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
211.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
211.3
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
210.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
207.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
206.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
201.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
200.3
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
196.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
195.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
195.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
195.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
194.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
194.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
194.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
193.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
191.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
188.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
187.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
185.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
184.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
184.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
183.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
183.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
180.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
179.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
178.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
176.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
175.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
172.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
169.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
168.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
167.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
166.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
165.5
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
165.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
163.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
163.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
162.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
161.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
161.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
161.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
160.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
159.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
155.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
150.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
148.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
144.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
143.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
135.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
132.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
128.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
128.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
126.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
124.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
121.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
115.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
115.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
112.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
111.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
104.7
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
104.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
104.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
101.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
100.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
95.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
89.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
82.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
81.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
78.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
70.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
68.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
68.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
67.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
63.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
58.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
57.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
52.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
49.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
47.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
44.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
42.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
40.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
37.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
34.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
29.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
26.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
24.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.