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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 226.4
Min RPKM: 23.3
Std RPKM: 44.2
Median RPKM: 93.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
226.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
219.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
210.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
204.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
194.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
193.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
181.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
172.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
167.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
167.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
164.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
161.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
156.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
154.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
148.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
143.0
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
141.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
141.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
139.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
139.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
138.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
138.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
137.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
136.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
134.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
129.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
127.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
125.3
GTEX-R55G-0226-SM-48FEI
40-49 years, female
125.3
GTEX-QLQW-0126-SM-447BK
30-39 years, male
123.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
122.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
117.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
117.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
116.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
115.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
114.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
110.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
109.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
109.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
106.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
105.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
103.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
103.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
102.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
101.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
101.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
98.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
96.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
95.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
94.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
94.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
93.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
92.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
92.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
90.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
90.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
89.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
89.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
89.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
87.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
86.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
84.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
83.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
83.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
82.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
81.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
77.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
77.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
76.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
76.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
74.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
74.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
73.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
73.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
73.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
73.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
72.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
70.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
70.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
69.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
68.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
68.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
68.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
67.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
67.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
63.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
63.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
60.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
60.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
58.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
58.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
56.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
55.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
54.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
43.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
42.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
42.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
41.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
41.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
33.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
32.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
30.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
24.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
23.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.