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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 999.6
Min RPKM: 167.0
Std RPKM: 133.4
Median RPKM: 367.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
999.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
784.8
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
728.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
702.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
643.5
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
611.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
595.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
574.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
560.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
548.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
548.1
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
544.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
543.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
539.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
526.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
515.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
509.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
479.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
477.2
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
464.4
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
462.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
461.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
460.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
460.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
460.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
458.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
457.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
454.3
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
453.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
453.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
439.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
437.1
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
425.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
424.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
421.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
414.3
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
413.1
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
409.2
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
405.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
404.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
398.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
397.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
393.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
381.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
380.5
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
380.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
373.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
368.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
367.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
367.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
364.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
362.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
360.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
358.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
358.5
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
356.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
352.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
349.8
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
347.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
346.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
343.3
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
343.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
342.6
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
341.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
340.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
339.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
336.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
326.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
322.6
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
320.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
316.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
314.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
311.3
GTEX-Q734-0726-SM-48TZP
40-49 years, female
311.2
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
309.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
306.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
305.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
297.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
295.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
292.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
284.9
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
279.5
GTEX-11I78-1926-SM-59878
50-59 years, female
269.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
267.3
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
256.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
254.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
253.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
251.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
247.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
235.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
233.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
224.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
222.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
217.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
211.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
168.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
167.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.