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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 2079.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1880.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 902.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 2438.5
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 2451.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1751.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 3520.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 2400.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 3165.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1665.5
Min RPKM: 391.6
Std RPKM: 295.6
Median RPKM: 993.6
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
1665.5
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
1658.2
GTEX-13112-0226-SM-5P9IV
50-59 years, male
1642.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
1629.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
1597.9
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
1569.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
1560.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
1558.6
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
1534.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
1533.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
1510.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
1490.6
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
1459.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
1452.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
1443.9
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
1438.5
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
1436.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
1426.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
1421.8
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
1396.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
1393.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
1390.1
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
1386.9
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
1386.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
1382.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
1373.9
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
1367.2
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
1354.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
1353.0
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
1324.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
1322.5
GTEX-11OF3-1826-SM-5987N
60-69 years, male
1319.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
1317.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
1309.4
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
1307.8
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
1300.2
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
1281.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
1280.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
1270.0
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
1262.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
1255.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
1246.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
1238.1
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
1228.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
1219.2
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
1217.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
1204.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
1198.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
1196.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
1189.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
1187.0
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
1185.8
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
1171.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
1163.9
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
1161.4
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
1152.7
GTEX-12696-0226-SM-5EGL3
60-69 years, male
1152.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
1148.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
1126.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
1125.6
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
1119.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
1116.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
1114.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
1112.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
1111.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
1102.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
1096.6
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
1089.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
1083.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
1081.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
1073.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
1069.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
1068.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
1046.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
1043.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
1035.0
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
1029.6
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
1028.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
1028.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
1022.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
1018.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
1014.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
1014.0
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
1007.5
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
1004.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
994.6
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
992.5
GTEX-X261-2326-SM-4PQYU
50-59 years, male
992.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
989.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
982.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
978.0
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
977.1
GTEX-V955-1926-SM-4KL1L
60-69 years, male
974.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
950.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
948.6
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
935.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
934.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
932.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
932.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
932.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
930.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
929.9
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
929.8
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
916.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
915.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
912.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
902.1
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
896.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
892.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
884.7
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
881.7
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
878.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
877.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
877.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
876.9
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
875.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
873.0
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
872.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
862.3
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
858.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
855.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
851.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
830.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
828.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
826.8
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
824.4
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
823.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
823.1
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
813.7
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
813.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
811.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
788.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
786.4
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
781.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
769.8
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
768.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
767.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
765.7
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
760.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
756.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
756.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
754.1
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
744.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
737.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
735.7
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
731.7
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
728.5
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
719.3
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
717.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
680.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
680.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
659.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
658.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
639.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
637.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
629.0
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
624.5
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
612.3
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
608.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
605.6
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
597.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
585.1
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
552.9
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
540.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
510.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
504.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
471.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
440.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
422.8
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
406.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
400.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
391.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.