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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 95.0
Min RPKM: 1.2
Std RPKM: 23.3
Median RPKM: 39.7
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
95.0
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
93.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
91.2
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
81.0
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
80.5
GTEX-1122O-1326-SM-5H11F
60-69 years, female
80.2
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
78.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
76.5
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
76.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
73.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
70.6
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
69.6
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
67.9
GTEX-111YS-1426-SM-5GID8
60-69 years, male
67.1
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
66.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
64.8
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
64.8
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
64.0
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
62.8
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
61.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
61.0
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
59.4
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
58.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
55.7
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
55.5
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
54.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
53.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
52.8
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
52.0
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
51.8
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
50.7
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
49.8
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
48.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
47.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
47.1
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
46.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
45.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
44.9
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
43.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
40.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
40.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
40.4
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
40.0
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
39.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
39.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
37.6
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
36.9
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
36.7
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
33.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
33.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
32.6
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
32.1
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
31.9
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
31.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
30.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
29.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
29.0
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
29.0
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
28.7
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
28.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
27.4
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
26.9
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
26.9
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
25.4
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
25.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
25.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
21.5
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
20.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
19.3
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
18.4
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
18.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
16.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
16.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
16.0
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
14.5
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
14.2
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
14.2
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
12.8
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
12.2
GTEX-1192X-2526-SM-59868
50-59 years, male
11.6
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
11.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
8.0
GTEX-117YX-0326-SM-5GICL
50-59 years, male
7.2
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
7.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
5.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
4.8
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
4.6
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
1.2
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
