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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 93.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 6.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 5.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 39.5
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 38.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 65
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 38.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 33.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 475.2
Min RPKM: 60.0
Std RPKM: 89.3
Median RPKM: 211.0
GTEX-RN64-1826-SM-48FDV
50-59 years, male
475.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
465.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
464.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
447.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
425.6
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
400.3
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
379.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
371.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
371.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
348.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
347.6
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
344.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
341.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
339.6
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
339.4
GTEX-YECK-1926-SM-4W21H
60-69 years, male
331.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
322.5
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
320.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
312.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
304.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
302.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
297.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
296.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
284.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
279.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
273.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
270.5
GTEX-RU72-1426-SM-46MUF
50-59 years, female
269.0
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
268.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
264.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
262.8
GTEX-S33H-1626-SM-4AD68
30-39 years, male
261.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
258.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
258.1
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
258.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
256.7
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
253.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
253.0
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
252.3
GTEX-13113-1326-SM-5GCOI
60-69 years, female
251.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
250.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
250.6
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
248.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
248.0
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
245.6
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
244.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
240.6
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
240.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
237.8
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
236.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
235.9
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
232.3
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
228.3
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
227.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
225.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
220.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
218.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
217.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
214.1
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
211.0
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
209.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
204.5
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
203.5
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
202.8
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
202.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
201.8
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
201.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
200.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
195.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
194.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
194.0
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
192.6
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
185.7
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
184.6
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
183.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
181.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
179.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
177.4
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
170.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
170.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
165.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
162.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
162.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
158.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
157.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
157.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
156.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
154.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
147.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
147.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
147.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
145.2
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
142.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
142.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
138.4
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
138.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
137.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
135.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
134.5
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
132.2
GTEX-QEL4-1226-SM-447A4
50-59 years, male
132.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
130.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
128.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
127.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
126.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
125.5
GTEX-Q734-0326-SM-48U15
40-49 years, female
125.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
119.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
118.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
116.6
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
112.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
105.3
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
101.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
101.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
92.2
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
85.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
79.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
73.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
60.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
