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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1048.7
Min RPKM: 327.2
Std RPKM: 143.3
Median RPKM: 491.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1048.7
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
912.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
869.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
838.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
836.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
825.4
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
793.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
772.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
733.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
724.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
695.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
684.1
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
675.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
664.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
659.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
656.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
635.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
635.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
617.0
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
614.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
613.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
608.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
599.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
577.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
576.3
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
575.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
572.1
GTEX-S32W-1226-SM-4AD67
50-59 years, female
562.1
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
556.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
554.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
549.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
546.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
544.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
542.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
538.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
530.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
528.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
527.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
524.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
523.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
519.5
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
514.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
513.2
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
511.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
506.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
502.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
493.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
491.8
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
491.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
480.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
477.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
475.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
472.5
GTEX-11I78-1926-SM-59878
50-59 years, female
472.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
472.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
457.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
444.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
443.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
440.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
440.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
437.3
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
433.3
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
432.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
431.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
428.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
427.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
427.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
422.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
421.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
420.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
418.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
415.2
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
410.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
406.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
403.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
400.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
400.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
399.8
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
398.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
393.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
393.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
387.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
385.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
383.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
382.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
375.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
375.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
371.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
367.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
355.8
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
355.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
354.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
346.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
342.1
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
336.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
329.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
327.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.