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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 556.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 654.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 169.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 212.2
Min RPKM: 7.5
Std RPKM: 51.0
Median RPKM: 41.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
212.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
208.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
203.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
200.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
194.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
187.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
185.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
178.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
172.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
166.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
163.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
158.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
157.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
156.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
154.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
152.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
152.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
146.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
144.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
144.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
141.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
141.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
137.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
137.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
136.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
135.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
132.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
132.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
132.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
130.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
127.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
126.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
125.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
122.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
121.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
117.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
115.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
113.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
112.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
110.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
110.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
110.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
108.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
107.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
103.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
100.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
100.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
98.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
97.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
97.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
97.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
93.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
93.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
92.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
92.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
88.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
88.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
88.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
86.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
86.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
85.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
85.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
85.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
84.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
83.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
81.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
77.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
77.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
76.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
74.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
74.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
74.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
73.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
68.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
68.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
67.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
67.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
67.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
65.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
64.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
61.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
60.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
58.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
58.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
57.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
56.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
56.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
56.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
55.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
55.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
54.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
52.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
51.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
50.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
49.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
49.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
48.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
47.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
47.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
47.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
46.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
46.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
45.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
44.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
43.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
42.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
42.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
41.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
41.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
40.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
40.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
39.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
38.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
37.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
36.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
35.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
35.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
35.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
35.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
35.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
34.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
34.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
33.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
32.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
32.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
32.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
31.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
30.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
30.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
30.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
29.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
28.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
28.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
28.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
28.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
27.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
27.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
27.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
27.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
26.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
26.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
26.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
26.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
26.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
25.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
24.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
24.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
24.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
23.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
23.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
23.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
22.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
22.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
21.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
20.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
20.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
20.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
20.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
20.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
20.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
20.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
20.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
19.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
19.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
18.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
18.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
17.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
17.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
17.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
17.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
17.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
16.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
16.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
16.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
15.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
15.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
15.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
15.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
15.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
15.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
15.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
15.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
14.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
14.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
14.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
14.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
13.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
13.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
13.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
13.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
12.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
12.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
12.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
12.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
12.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
12.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
12.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
12.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
11.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
11.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
11.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
11.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
10.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
9.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
9.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
9.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
9.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
9.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
9.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
8.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
8.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
8.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
8.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
7.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.