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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 279.7
Min RPKM: 54.9
Std RPKM: 41.0
Median RPKM: 128.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
279.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
252.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
232.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
199.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
199.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
195.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
192.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
185.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
183.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
182.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
181.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
178.9
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
177.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
176.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
176.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
176.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
173.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
172.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
171.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
169.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
166.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
164.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
164.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
164.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
160.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
159.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
159.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
156.6
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
155.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
155.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
153.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
151.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
151.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
149.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
149.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
148.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
148.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
146.4
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
145.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
139.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
137.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
137.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
136.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
136.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
136.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
135.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
133.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
132.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
131.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
130.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
130.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
129.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
127.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
127.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
126.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
126.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
122.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
121.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
119.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
118.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
116.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
116.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
116.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
115.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
112.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
112.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
111.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
111.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
111.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
110.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
109.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
109.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
107.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
107.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
106.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
106.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
103.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
102.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
101.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
101.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
98.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
98.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
98.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
96.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
96.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
94.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
94.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
89.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
88.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
88.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
88.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
87.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
87.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
84.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
84.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
80.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
74.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
74.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
70.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
68.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
63.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
62.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
60.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
54.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.