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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 727.6
Min RPKM: 4.0
Std RPKM: 96.7
Median RPKM: 103.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
727.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
322.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
285.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
275.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
266.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
264.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
256.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
255.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
254.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
239.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
236.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
234.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
231.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
230.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
224.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
222.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
218.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
212.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
203.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
202.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
202.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
198.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
197.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
194.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
193.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
191.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
187.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
186.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
180.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
178.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
176.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
173.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
171.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
170.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
165.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
163.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
163.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
159.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
157.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
155.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
154.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
151.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
148.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
147.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
146.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
139.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
138.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
135.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
131.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
131.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
125.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
124.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
124.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
117.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
117.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
113.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
111.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
109.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
103.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
103.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
97.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
96.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
95.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
94.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
93.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
92.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
90.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
88.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
83.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
83.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
81.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
78.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
77.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
76.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
74.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
73.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
72.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
71.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
70.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
69.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
63.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
56.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
53.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
53.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
50.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
50.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
47.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
47.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
47.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
47.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
43.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
42.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
39.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
39.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
38.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
38.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
34.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
30.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
30.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
28.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
25.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
24.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
23.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
22.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
21.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
20.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
15.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
10.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
10.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
10.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
10.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
10.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
7.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
5.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
5.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
4.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
4.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.