We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 471
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 465.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 223.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 506
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 587
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 392.8
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 303.8
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 288
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 300.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 965.6
Min RPKM: 221.6
Std RPKM: 146.9
Median RPKM: 559.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
965.6
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
949.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
820.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
817.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
806.7
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
805.6
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
802.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
795.3
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
791.8
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
789.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
786.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
785.8
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
782.9
GTEX-13112-0226-SM-5P9IV
50-59 years, male
782.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
769.0
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
738.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
732.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
729.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
727.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
724.4
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
723.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
718.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
716.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
716.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
714.6
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
714.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
713.1
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
701.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
701.0
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
684.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
683.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
679.5
GTEX-S95S-1126-SM-4B64E
60-69 years, male
672.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
671.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
669.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
662.9
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
662.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
660.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
657.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
655.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
654.9
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
653.9
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
642.6
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
642.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
634.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
632.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
631.5
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
629.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
626.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
625.7
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
625.0
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
623.6
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
620.9
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
620.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
618.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
615.8
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
613.5
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
613.3
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
612.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
611.5
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
608.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
607.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
606.5
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
603.0
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
601.3
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
600.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
598.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
598.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
598.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
596.3
GTEX-V955-1926-SM-4KL1L
60-69 years, male
592.4
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
592.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
592.1
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
589.7
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
587.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
587.2
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
584.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
583.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
578.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
569.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
569.0
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
567.7
GTEX-R55C-1426-SM-48FED
40-49 years, male
563.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
563.7
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
561.2
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
559.6
GTEX-11DXZ-2126-SM-59881
50-59 years, male
558.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
558.3
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
557.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
554.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
554.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
549.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
545.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
544.6
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
543.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
542.8
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
542.8
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
542.0
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
540.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
539.7
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
539.2
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
535.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
534.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
533.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
526.9
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
525.7
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
525.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
521.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
521.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
519.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
519.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
514.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
514.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
511.7
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
508.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
505.4
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
504.0
GTEX-R55D-0126-SM-48FEL
50-59 years, male
503.5
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
503.1
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
502.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
501.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
497.1
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
495.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
493.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
491.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
481.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
480.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
477.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
475.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
474.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
465.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
465.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
461.3
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
459.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
452.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
445.8
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
443.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
440.1
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
436.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
430.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
413.7
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
409.5
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
405.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
390.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
389.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
379.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
378.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
376.6
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
365.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
364.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
363.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
359.9
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
352.1
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
344.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
341.8
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
334.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
327.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
323.1
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
310.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
306.8
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
303.9
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
302.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
288.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
281.2
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
279.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
266.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
265.1
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
260.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
255.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
229.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
223.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
221.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.