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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 584.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 715.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 242
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 769.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 766.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 518.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 856.7
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 649
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 800.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 343.8
Min RPKM: 51.6
Std RPKM: 59.0
Median RPKM: 184.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
343.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
327.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
310.9
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
304.4
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
298.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
295.5
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
293.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
290.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
289.2
GTEX-13112-0226-SM-5P9IV
50-59 years, male
286.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
286.6
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
282.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
282.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
281.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
279.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
279.0
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
275.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
275.1
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
270.8
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
270.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
261.0
GTEX-117XS-2026-SM-5GID1
60-69 years, male
259.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
258.3
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
255.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
250.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
248.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
248.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
247.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
247.0
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
244.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
241.8
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
240.9
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
240.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
239.7
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
237.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
236.0
GTEX-QLQW-1026-SM-447A9
30-39 years, male
235.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
235.6
GTEX-11DXZ-2126-SM-59881
50-59 years, male
234.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
234.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
232.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
229.2
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
228.0
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
227.7
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
226.9
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
224.6
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
223.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
222.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
222.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
218.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
218.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
218.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
218.2
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
217.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
214.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
214.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
213.7
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
210.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
210.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
208.2
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
207.4
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
207.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
206.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
206.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
205.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
205.2
GTEX-11OF3-1826-SM-5987N
60-69 years, male
204.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
203.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
202.7
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
201.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
201.2
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
200.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
199.6
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
198.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
198.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
198.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
197.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
197.3
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
196.3
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
195.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
195.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
194.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
193.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
186.8
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
185.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
184.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
184.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
182.8
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
182.5
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
182.0
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
181.9
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
181.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
180.5
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
179.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
177.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
177.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
177.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
177.7
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
176.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
176.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
176.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
175.4
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
174.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
174.3
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
174.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
174.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
171.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
171.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
169.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
169.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
169.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
169.0
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
168.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
168.2
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
168.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
167.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
166.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
166.3
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
163.7
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
163.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
162.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
161.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
161.2
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
160.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
158.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
157.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
156.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
155.8
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
152.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
149.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
145.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
145.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
145.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
144.0
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
139.5
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
138.8
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
135.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
134.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
134.1
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
133.6
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
133.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
132.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
132.8
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
131.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
129.1
GTEX-RN64-2326-SM-48FDW
50-59 years, male
127.0
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
126.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
124.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
123.4
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
120.4
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
119.3
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
115.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
115.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
114.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
112.7
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
112.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
108.5
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
104.3
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
103.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
101.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
100.2
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
94.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
92.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
82.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
79.1
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
78.5
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
73.7
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
71.8
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
71.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
60.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
60.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
51.6
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.