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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 155.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 216
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 258.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 204.7
Min RPKM: 50.7
Std RPKM: 26.9
Median RPKM: 88.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
204.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
196.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
174.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
168.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
163.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
162.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
161.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
154.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
148.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
147.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
146.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
145.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
145.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
144.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
144.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
143.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
139.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
136.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
135.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
134.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
133.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
133.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
131.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
131.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
127.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
127.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
125.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
123.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
122.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
122.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
122.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
121.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
121.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
121.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
118.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
117.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
117.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
114.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
113.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
113.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
113.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
112.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
111.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
111.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
111.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
111.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
111.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
111.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
110.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
109.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
109.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
108.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
107.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
107.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
107.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
106.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
106.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
105.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
105.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
105.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
105.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
102.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
102.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
102.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
102.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
102.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
102.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
101.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
101.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
100.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
100.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
99.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
99.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
99.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
98.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
98.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
97.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
97.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
97.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
96.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
96.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
96.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
95.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
95.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
95.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
94.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
94.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
94.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
94.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
93.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
93.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
93.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
93.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
93.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
92.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
92.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
91.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
91.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
91.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
90.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
90.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
90.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
89.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
89.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
89.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
89.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
88.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
88.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
87.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
87.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
87.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
87.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
87.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
86.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
86.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
86.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
86.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
86.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
85.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
85.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
85.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
85.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
85.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
85.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
85.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
85.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
84.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
84.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
84.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
84.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
84.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
84.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
84.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
83.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
83.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
82.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
82.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
81.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
81.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
80.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
80.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
80.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
79.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
79.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
79.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
79.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
78.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
78.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
78.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
78.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
78.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
77.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
77.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
77.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
77.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
76.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
76.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
75.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
75.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
75.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
74.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
74.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
74.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
74.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
74.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
73.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
73.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
72.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
72.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
72.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
72.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
72.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
71.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
71.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
71.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
71.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
71.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
70.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
69.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
69.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
69.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
68.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
68.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
68.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
68.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
67.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
67.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
66.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
66.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
66.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
66.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
66.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
66.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
64.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
64.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
64.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
64.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
64.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
63.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
63.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
63.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
63.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
61.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
61.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
60.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
60.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
60.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
58.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
58.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
57.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
57.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
55.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
52.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
50.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.