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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 100.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 10.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 10.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 390.5
Min RPKM: 4.2
Std RPKM: 75.5
Median RPKM: 115.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
390.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
323.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
304.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
303.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
300.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
284.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
283.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
272.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
267.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
261.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
258.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
254.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
252.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
251.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
249.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
245.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
245.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
241.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
240.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
239.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
235.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
232.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
232.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
231.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
227.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
226.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
223.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
222.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
218.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
218.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
217.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
215.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
214.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
212.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
212.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
210.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
209.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
209.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
206.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
205.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
198.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
197.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
195.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
192.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
189.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
188.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
187.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
187.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
187.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
186.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
186.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
184.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
184.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
182.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
180.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
180.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
176.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
174.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
174.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
171.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
171.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
171.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
170.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
168.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
166.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
166.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
165.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
165.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
162.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
161.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
160.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
159.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
157.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
152.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
151.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
148.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
147.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
146.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
145.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
145.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
145.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
144.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
144.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
143.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
142.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
141.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
141.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
139.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
137.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
137.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
136.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
135.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
134.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
133.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
131.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
131.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
129.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
127.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
125.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
124.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
124.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
120.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
120.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
118.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
117.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
116.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
116.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
115.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
113.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
111.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
111.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
110.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
110.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
109.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
108.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
106.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
104.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
103.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
101.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
99.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
98.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
97.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
97.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
96.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
96.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
95.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
95.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
93.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
92.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
92.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
92.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
91.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
91.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
90.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
90.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
89.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
88.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
86.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
86.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
84.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
82.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
80.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
79.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
79.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
77.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
75.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
72.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
70.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
70.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
69.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
69.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
68.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
68.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
68.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
67.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
67.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
66.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
65.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
65.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
64.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
62.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
61.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
61.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
61.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
60.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
59.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
59.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
58.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
58.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
58.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
57.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
56.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
56.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
56.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
54.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
54.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
53.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
53.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
52.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
47.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
47.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
46.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
45.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
45.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
45.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
44.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
44.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
44.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
43.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
41.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
38.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
36.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
35.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
35.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
34.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
34.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
33.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
33.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
32.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
32.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
31.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
27.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
26.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
24.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
23.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
23.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
23.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
20.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
19.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
18.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
15.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
15.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
11.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
4.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.