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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 92.3
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 79.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 57.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 98.8
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 70.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 104.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 74.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 119.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 111.9
Min RPKM: 19.9
Std RPKM: 13.0
Median RPKM: 64.3
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
111.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
105.6
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
102.7
GTEX-R53T-0326-SM-48FEC
50-59 years, female
94.8
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
89.5
GTEX-12696-0826-SM-5EGGE
60-69 years, male
86.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
86.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
85.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
84.6
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
84.0
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
82.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
81.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
80.5
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
80.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
79.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
78.7
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
78.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
77.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
77.7
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
77.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
76.2
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
75.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
75.6
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
75.2
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
73.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
73.4
GTEX-QESD-2026-SM-447BI
20-29 years, male
72.9
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
72.8
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
72.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
72.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
71.8
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
71.8
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
71.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
71.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
71.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
70.6
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
70.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
70.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
69.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
69.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
69.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
69.1
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
68.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
68.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
68.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
68.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
67.8
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
67.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
67.6
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
66.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
66.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
66.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
66.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
66.1
GTEX-YECK-1926-SM-4W21H
60-69 years, male
66.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
66.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
65.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
65.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
65.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
64.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
64.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
63.3
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
62.9
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
62.7
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
62.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
62.5
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
62.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
62.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
62.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
61.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
61.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
61.6
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
61.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
60.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
60.3
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
59.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
59.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
59.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
59.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
59.1
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
58.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
58.9
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
58.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
58.8
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
58.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
58.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
58.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
58.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
57.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
57.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
57.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
56.7
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
56.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
56.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
56.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
56.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
56.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
56.0
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
55.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
55.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
55.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
54.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
54.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
54.3
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
54.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
53.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
53.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
53.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
53.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
51.9
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
51.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
49.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
49.2
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
48.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
48.3
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
46.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
41.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
30.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
19.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
