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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 105.1
Min RPKM: 29.7
Std RPKM: 15.8
Median RPKM: 57.7
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
105.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
99.2
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
84.8
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
81.5
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
80.5
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
78.1
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
77.8
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
77.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
77.1
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
75.8
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
74.5
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
74.4
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
72.0
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
70.8
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
69.2
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
68.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
65.2
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
65.1
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
64.8
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
60.5
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
60.4
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
59.9
GTEX-X261-2426-SM-4PQZU
50-59 years, male
59.9
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
59.8
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
59.2
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
59.2
GTEX-13113-1526-SM-5EGHV
60-69 years, female
58.9
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
58.8
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
57.7
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
57.7
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
55.4
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
54.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
54.5
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
54.2
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
53.6
GTEX-11P82-0926-SM-5986X
20-29 years, male
53.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
53.1
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
52.0
GTEX-Y111-2626-SM-4TT24
50-59 years, male
51.9
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
51.5
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
51.2
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
49.4
GTEX-1445S-2926-SM-5O993
60-69 years, male
47.9
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
47.1
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
46.4
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
44.2
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
44.1
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
41.5
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
40.3
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
40.2
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
39.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
38.9
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
37.7
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
35.4
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
34.9
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
33.2
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
29.7
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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