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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 54.9
Min RPKM: 0.7
Std RPKM: 11.1
Median RPKM: 9.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
54.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
48.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
47.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
46.9
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
40.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
34.4
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
32.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
31.3
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
29.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
28.8
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
23.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
22.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
22.2
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
21.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
21.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
21.3
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
20.8
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
20.2
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
18.6
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
18.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
17.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
16.8
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
16.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
15.3
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
15.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
15.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
14.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
14.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
14.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
14.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
13.6
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
13.4
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
13.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
12.6
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
12.3
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
12.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
11.8
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
11.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
11.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
11.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
10.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
10.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
10.6
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
10.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
10.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
10.1
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
10.0
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
9.5
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
9.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
9.4
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
9.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
8.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
8.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
8.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
8.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
8.0
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
7.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
7.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
7.0
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
7.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
6.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
6.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
6.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
6.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
5.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
5.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
5.6
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
5.5
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
5.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
5.4
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
5.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
5.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
5.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
5.0
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
4.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
4.7
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
4.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
4.4
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
4.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
4.1
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
3.9
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
3.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
3.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
3.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
3.6
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
3.1
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
3.1
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
2.9
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
2.8
GTEX-11I78-2026-SM-5987C
50-59 years, female
1.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
1.9
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
1.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
1.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
1.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
0.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
0.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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