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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 112.5
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 119.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 38.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 75.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 93.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 69
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 79.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 107.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 132.7
Min RPKM: 11.6
Std RPKM: 22.4
Median RPKM: 48.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
132.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
132.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
108.6
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
106.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
101.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
97.0
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
88.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
88.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
86.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
85.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
83.4
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
81.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
78.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
75.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
73.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
71.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
71.4
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
67.8
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
67.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
65.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
65.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
65.2
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
63.3
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
62.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
62.6
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
62.5
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
61.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
61.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
60.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
60.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
59.7
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
59.6
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
58.1
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
57.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
57.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
56.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
55.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
55.3
GTEX-12696-0826-SM-5EGGE
60-69 years, male
55.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
55.1
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
55.0
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
54.3
GTEX-R53T-0326-SM-48FEC
50-59 years, female
54.0
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
53.7
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
52.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
52.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
52.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
52.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
51.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
51.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
51.5
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
50.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
50.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
50.1
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
49.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
49.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
48.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
48.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
48.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
48.5
GTEX-S32W-1926-SM-4AD63
50-59 years, female
48.2
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
47.2
GTEX-X261-1726-SM-4PQYT
50-59 years, male
46.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
46.1
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
46.0
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
45.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
45.1
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
43.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
43.2
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
43.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
42.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
42.3
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
42.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
41.7
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
41.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
41.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
40.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
40.3
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
39.9
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
39.8
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
39.0
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
38.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
38.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
38.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
37.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
37.3
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
36.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
36.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
36.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
36.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
35.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
34.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
33.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
33.5
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
33.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
32.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
32.3
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
31.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
31.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
28.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
27.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
27.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
26.3
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
25.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
25.2
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
25.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
24.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
24.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
24.1
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
23.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
23.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
21.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
21.2
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
20.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
20.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
19.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
13.9
GTEX-11GSP-0626-SM-5986T
60-69 years, female
12.5
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
11.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
