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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 350
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 78.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 39.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 173.6
Min RPKM: 12.6
Std RPKM: 31.4
Median RPKM: 88.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
173.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
171.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
159.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
159.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
156.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
153.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
153.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
148.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
148.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
148.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
144.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
144.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
144.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
143.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
139.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
136.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
135.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
133.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
132.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
132.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
131.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
130.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
130.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
130.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
129.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
128.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
127.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
125.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
122.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
122.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
121.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
121.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
121.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
121.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
120.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
119.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
119.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
119.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
117.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
117.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
116.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
116.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
114.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
114.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
113.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
112.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
112.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
112.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
111.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
111.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
110.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
110.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
109.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
109.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
108.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
107.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
107.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
107.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
107.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
107.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
107.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
106.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
106.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
105.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
105.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
105.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
104.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
103.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
103.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
103.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
102.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
102.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
102.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
101.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
100.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
100.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
100.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
100.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
99.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
99.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
98.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
97.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
97.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
97.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
97.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
97.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
96.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
95.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
95.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
94.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
94.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
94.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
94.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
94.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
94.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
93.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
91.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
91.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
90.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
90.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
89.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
89.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
89.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
88.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
88.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
88.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
88.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
88.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
87.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
87.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
87.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
87.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
87.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
86.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
86.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
86.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
86.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
85.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
85.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
85.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
83.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
83.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
83.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
81.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
80.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
80.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
79.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
78.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
78.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
77.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
76.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
76.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
75.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
75.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
74.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
73.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
73.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
72.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
71.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
71.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
71.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
71.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
70.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
70.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
70.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
70.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
69.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
69.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
69.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
68.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
68.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
68.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
68.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
68.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
67.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
67.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
66.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
66.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
64.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
63.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
62.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
62.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
61.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
61.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
61.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
61.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
60.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
60.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
59.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
59.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
58.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
58.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
58.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
58.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
58.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
57.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
57.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
57.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
56.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
56.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
55.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
54.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
54.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
54.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
53.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
53.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
53.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
51.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
51.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
50.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
49.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
48.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
47.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
47.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
47.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
46.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
44.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
43.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
43.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
42.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
41.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
41.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
40.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
40.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
40.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
40.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
40.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
39.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
39.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
36.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
36.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
35.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
32.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
12.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.