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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 431.7
Min RPKM: 25.4
Std RPKM: 66.4
Median RPKM: 85.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
431.7
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
301.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
283.9
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
282.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
229.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
226.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
225.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
208.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
194.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
189.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
179.9
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
178.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
171.8
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
170.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
158.9
GTEX-S32W-1226-SM-4AD67
50-59 years, female
156.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
143.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
143.4
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
142.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
140.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
136.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
134.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
131.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
129.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
127.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
121.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
120.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
119.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
118.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
113.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
113.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
113.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
112.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
108.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
106.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
105.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
101.9
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
97.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
97.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
95.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
95.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
93.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
93.0
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
89.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
88.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
87.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
87.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
86.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
85.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
84.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
82.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
82.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
81.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
81.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
80.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
78.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
77.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
76.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
75.5
GTEX-11I78-1926-SM-59878
50-59 years, female
75.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
74.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
71.6
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
70.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
70.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
69.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
68.7
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
68.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
68.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
67.5
GTEX-QCQG-1426-SM-48U22
50-59 years, female
67.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
66.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
66.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
66.2
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
65.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
62.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
61.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
59.8
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
57.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
54.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
53.5
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
50.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
49.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
49.1
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
47.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
47.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
46.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
46.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
45.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
43.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
39.3
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
39.1
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
34.5
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
33.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
32.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
31.2
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
31.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
25.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.