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COLON - Expression summary
RNA expressioni
HPA:44.3TPM
GTEx:37.6RPKM
FANTOM5:126.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 44.3
overview Male, age 54 Sample 1
TPM: 30.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 32.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 49.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 22.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 64.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 60
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 47.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 55.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 37.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 55.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 50.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 49.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 37.6
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 41.4
Samples: 149

Max RPKM: 63.3
Min RPKM: 22.9
Std RPKM: 7.6
Median RPKM: 40.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 63.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 62.8
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 62.3
GTEX-145LS-2926-SM-5O99G 60-69 years, female 59.4
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 55.1
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 54.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 54.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 53.8
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 52.9
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 52.7
Show all
Colon - Transverse
RPKM: 34.8
Samples: 196

Max RPKM: 66.9
Min RPKM: 14.9
Std RPKM: 7.7
Median RPKM: 33.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 66.9
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 58.0
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 55.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 53.2
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 53.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 52.7
GTEX-S341-1426-SM-4AD6U 40-49 years, female 52.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 52.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 51.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 50.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 126.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 105.1
FF:10014-101C5 62,83,84 years, mixed 126.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.