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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 35.4
Min RPKM: 1.7
Std RPKM: 8.9
Median RPKM: 13.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
35.4
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
35.1
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
34.6
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
34.5
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
31.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
31.3
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
31.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
28.9
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
28.6
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
27.5
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
27.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
27.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
26.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
26.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
25.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
24.8
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
24.0
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
23.7
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
23.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
23.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
22.5
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
22.2
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
20.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
20.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
19.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
19.7
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
19.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
18.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
18.7
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
18.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
17.3
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
17.1
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
16.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
15.9
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
15.8
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
15.6
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
15.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
15.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
15.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
14.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
14.5
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
14.4
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
14.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
14.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
14.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
13.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
13.7
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
13.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
13.4
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
12.9
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
12.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
12.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
11.3
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
11.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
11.0
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
10.8
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
10.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
10.5
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
9.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
9.1
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
9.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
8.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
8.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
8.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
8.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
8.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
8.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
8.2
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
8.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
8.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
7.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
7.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
7.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
7.8
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
7.2
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
7.2
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
6.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
6.2
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
6.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
5.9
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
5.6
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
5.4
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
5.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
5.0
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
4.9
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
4.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
4.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
3.6
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
3.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
2.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
2.7
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
2.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
2.0
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
1.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
1.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
1.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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