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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 303.4
Min RPKM: 0.0
Std RPKM: 80.4
Median RPKM: 48.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
303.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
302.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
292.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
263.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
249.3
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
243.1
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
234.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
221.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
212.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
204.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
192.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
191.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
182.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
174.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
164.5
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
153.4
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
149.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
145.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
136.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
131.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
123.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
117.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
116.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
113.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
99.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
95.6
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
87.3
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
85.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
85.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
84.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
78.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
75.7
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
71.8
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
71.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
70.0
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
69.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
66.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
60.9
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
60.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
58.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
57.3
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
55.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
51.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
51.1
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
50.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
50.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
49.3
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
49.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
48.2
GTEX-QCQG-1226-SM-48U23
50-59 years, female
45.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
44.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
44.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
43.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
39.2
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
38.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
36.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
33.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
29.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
27.6
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
22.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
20.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
20.2
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
17.4
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
17.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
12.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
10.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
10.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
7.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
7.0
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
6.6
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
4.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
2.7
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
1.9
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
1.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
1.2
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
1.1
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.7
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
0.5
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
0.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.1
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.1
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.1
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.0
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.0
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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