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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 188.8
Min RPKM: 0.7
Std RPKM: 36.0
Median RPKM: 28.1
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
188.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
184.5
GTEX-117YX-0326-SM-5GICL
50-59 years, male
147.2
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
130.5
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
113.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
100.8
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
99.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
88.8
GTEX-1192X-2526-SM-59868
50-59 years, male
87.8
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
86.8
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
82.2
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
79.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
67.8
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
66.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
66.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
62.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
61.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
60.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
59.7
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
59.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
58.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
57.5
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
51.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
50.3
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
49.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
48.6
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
47.8
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
43.4
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
42.1
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
41.5
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
40.6
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
39.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
39.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
39.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
37.9
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
37.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
37.6
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
36.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
35.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
34.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
33.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
30.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
30.1
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
28.9
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
27.4
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
26.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
25.9
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
25.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
25.3
GTEX-ZTSS-0926-SM-59865
40-49 years, male
25.2
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
24.7
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
24.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
24.0
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
24.0
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
23.8
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
22.9
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
22.7
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
22.0
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
22.0
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
21.3
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
21.1
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
21.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
20.6
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
19.4
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
19.2
GTEX-1122O-1326-SM-5H11F
60-69 years, female
18.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
18.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
18.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
18.3
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
18.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
18.1
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
17.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
16.0
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
15.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
14.1
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
13.4
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
13.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
12.9
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
12.7
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
12.5
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
11.7
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
10.1
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
10.0
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
8.8
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
7.9
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
6.6
GTEX-111YS-1426-SM-5GID8
60-69 years, male
5.4
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
0.7
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.