September 14, 2019 - September 18, 2019
HPA Presence at HUPO 2019Monday September 16:10:40am-12:40pm Session: Single Cell Proteomics Emma Lundberg presents "Single cell proteome variability"Cecilia Lindskog gives a talk on "Integration of transcriptomics and antibody-based proteomics for spatial localization of cell type-specific expression patterns"
14:00pm-14:45pmMathias Uhlen holds a plenary session on "The Human Protein Atlas - Implications for Human Biology, Drug Development and Precision Medicine"
15:15pm-17:15pmSession HPP2: Rheumatic and Autoimmune DisordersPeter Nilsson presents "Affinity proteomics for array based profiling of autoantibody repertoires"
18:00pm-19:15pmPoster session 1:Cristina Al-Khalili Szigyarto, "Antibodypedia reveals trends in antibody validation"Fredrik Edfors, "Absolute Quantification of Apolipoproteins Following Treatment with Omega-3 Carboxylic Acids and Fenofibrate"Feria Hikmet Noraddin, "Characterization of cancer/testis antigens in non-small-cell lung cancer using transcriptomics and antibody-based proteomics"Andreas Hober, "A resource for improved antibody validation"
Tuesday September 17:10:40am-12:40pmSession HPP 3: "P3: Plasma, Pediatrics and Proteomics" Cristina Al-Khalili Szigyarto gives a talk on "Orthogonal validation of Duchenne Muscular Dystrophy biomarkers using targeted proteomics"
17:15pm-18:30pmPoster session 2:Per Oksvold, "The Human Protein Atlas, version 19: accessing data for your research"Evelina Sjöstedt, "A new brain-centric atlas with expression maps in human, pig and mouse brain"
Wednesday September 18: 10:00am-12:00pmSession: Cardiovascular and Metabolic DiseaseJochen Schwenk presents "Integrative analysis of plasma proteomes from prediabetes and diabetes progression: An IMI DIRECT study"
September 22, 2019 - September 26, 2019
The 14th Conference on Protein Expression in Animal Cells (14th PEACe), will be held on September 22-26, 2019 in Newport, Rhode Island, USA.On Monday, September 23 at 11:15-12:15, Mathias Uhlen holds the PEACe keynote lecture, titled "The Human Secretome Project - generation of all human secreted proteins in mammalian cell cultures".
Visions in Cytometry
September 25, 2019 - September 27, 2019
At the conference "Visions in Cytometry - 29th Annual Meeting of the German Society of Cytometry" in Berlin, Peter Thul will give a lecture about SciLifeLab and the HPA Cell Atlas in the European Guest session: Sweden.
BioImage Informatics 2019
October 2, 2019 - October 4, 2019
On October 2, at 13:30-14:30, Emma Lundberg is the afternoon keynote speaker on: "Spatiotemporal dissection of the human proteome" at the BioImage Informatics 1029, held at the Allen Institute, Seattle.
Precision Health: Molecular Basis, Technology and Digital Health
November 13, 2019 - November 16, 2019
On Monday November 13, at 16:00-16:30, Emma Lundberg will give a talk on "Spatial proteomics and cell biology" at the EMBO Workshop, Precision Health: Molecular Basis, Technology and Digital Health, held at EMBL Heidelberg, Germany.
Multiomics to Mechanisms - Challenges in Data Integration
September 11, 2019 - September 13, 2019
EMBO/EMBL Symposia, held at EMBL HeidelbergEmma Lundberg will talk on "Single cell proteome variability in human cells" on Thursday September 12, at 09:00 - 09:30.This conference will provide a platform for bringing together leading researchers from computational biology, various omics fields and technology development to present their latest work and discuss applications, future ideas and the challenges for integrating large-scale biological data across different biological technologies and disciplines. A specific focus will be on discussing data integration of high-throughput technologies with molecular biology approaches. This conference aims to inspire novel ideas for data integration across the different omics fields and hence may sparkle exciting new future collaborations.Symposium Overview
The Omics Revolution: Beyond the Genome
September 8, 2019
Cecilia Lindskog Bergström will attend this one-day satellite meeting which will focus on the key role that proteomic and other omics technologies will play in the development of personalized/precision medicine.
FEBS Sir Hans Krebs Lecture
July 6, 2019 - July 11, 2019
On Monday July 8, at 13.45 pm, Mathias Uhlen will give the FEBS Sir Hans Krebs Lecture, in Krakow, Poland titled "The Human Protein Atlas - Implications for Human Biology, Drug Development and Precision Medicine".
Spatial protein multiplexing in health and disease
May 10, 2019
Charlotte Stadler will give a presentation at the "Spatial protein multiplexing in health and disease" meeting at Launchlab, Basel, Switzerland on May 10.
BioInnovation Institute Talks at the Square
April 23, 2019, 9:30am CEST
On April 23 2019, Mathias Uhlen will visit BioInnovation Institute to give a talk on his experience on being a serial entrepreneur.
At the event Mathias will talk about the knowledge he has acquired through his long and esteemed career as both an academic and an entrepreneur. Mathias has more than 600 peer-reviewed publications and more than 70 international patent applications. He has founded 15 biotech start-up companies, and he has been member of many Board of Directors, including international public companies, such as Bure Equity (Sweden), Novozymes (Denmark), Nordiag (Norway) and Amersham (UK).
International Rouen P2M Symposium on Precision Medicine
March 28, 2019 - March 29, 2019
On March 29th, 2019, Mathias Uhlén will give a keynote on "The Human Protein Atlas - implications for human biology, drug development and precision medicine" at the International Rouen P2M Symposium on Precision Medicine "Pathways to Precision Medicine". This will be held at Rouen Health Sciences School, Rouen, France on March 28-29, 2019 Normandie (near Paris). The program of this symposium will gather international distinguished leaders in precision medicine from academia, healthcare and industry and will feature cutting-edge innovative technologies in the field. The invited speakers will share their thoughts and visions about the latest developments, advancements and international initiatives in precision medicine. The themes will include biobanking, laboratory medicine, biomarkers, drug discovery and companion diagnostics, omics, medical imaging, radiomics, critical care, inherited metabolic diseases, bioinformatics, electronic health records and big data. Ethical and societal challenges will also be discussed regarding the ever-changing healthcare ecosystem and regulatory landscape.Preliminary program
9th Alpbach Workshop on Affinity Proteomics
March 11, 2019 - March 13, 2019
The 9th Alpbach workshop will take place in the state-of-the-art Congress Centre in Alpbach/Austria.
Participants from HPA are:
Monday March 11Session 1: Protein and Cell AtlasMathias Uhlen: Mapping the human blood and brain using omics
Session 3: Antibody Design and TherapeuticsSophia Hober: The development of small protein domains for biotechnical and medical use
Session 4: Antibody Diagnostic ToolsJochen Schwenk: Insights into integrating the human plasma proteome
Wednesday March 13Session 8: Arrays (Chair: Peter Nilsson)Anna Månberg; Protein profiling reveals correlations to CSF tau levels in preclinical Alzheimer's disease
Single Cells: Technology to Biology
February 24, 2019 - February 26, 2019
Dr. Emma Lundberg, will give a presentation on "Dissecting spatiotemporal variations of the human proteome" at the Cell Symposium "Single Cells: Technology to Biology" held at the A* STAR Genome Institute of Singapore. She will present on Monday February 25, at 16:15.Programme
Festival of Genomics
January 23, 2019 - January 24, 2019
Dr. Cecilia Lindskog, Director Tissue Atlas, will give a presentation on "The Human Protein Atlas - Mapping Through Transcriptomics and Proteomics" at the Festival of Genomics held at the Business Design Centre in London. The talk is at 13:00 on Thursday, January 24.Programme
2018 ASCB | EMBO Meeting
December 8, 2018 - December 12, 2018
The Human Protein Atlas will be exhibiting at the 2018 ASCB EMBO meeting in San Diego. In booth number #624 you will meet the Cell Atlas team Emma Lundberg, Christian Gnann, Lovisa Åkesson and Peter Thul. They will also present four posters. Preliminary programme
The Symphony of Biomarkers
November 30, 2018 - December 1, 2018
Dr. Cecilia Lindskog Bergström will present "The Human Protein Atlas: Spatial proteomics in health and disease" at the Third Scandinavian Tumor Pathology Seminar, "The Symphony of Biomarkers" taking place at Hotel Gustavelund, in Tuusula, Finland. Her talk is on Saturday December 1, at 08:30 am. Programme
November 29, 2018, 10:47am CEST
Current challenges on validation of biomarkers for clinical trials are presented by Dr Cristina Al-Khalili Szigyarto, on the 29th of November at the workshop on "Advances in Biomarkers and Imaging in clinical trial design for DMD and other Neuromuscular diseases" in Prague. The workshop is organised by VISION-DMD and includes also an expert panel discussion, with all invited speakers, aiming to define the optimal next steps in developing biomarkers for clinical trails.
Flow Cytometry & Imaging from single cell to the patient
November 14, 2018 - November 14, 2018
Dr Charlotte Stadler is Plenary Keynote Speaker presenting "An image based subcellular map of the human proteome" at the The 6th biennial Pharmaceutical Flow Cytometry and Imaging meeting, Stevenage, UK.Overview
Clinical Proteomics: towards personalized medicine and health
November 7, 2018 - November 8, 2018
Dr. Cecilia Lindskog, will present "The Human Protein Atlas - implications for human biology and precision medicine", at the meeting "Clinical Proteomics: towards personalized medicine and health", at B-Debate, International Center for Scientific Debate in Barcelona. Her talk is on November 7, at 14.30 pm.Programme
November 6, 2018 - November 7, 2018
Dr. Jochen Schwenk will present "Affinity Proteomics on Beads" at the 4th xMAP Connect in Amsterdam, held at the Royal Tropical Institute. His talk will be at 10.40 on November 7.Programme
Biomarkers – methods and technologies
October 25, 2018 - October 26, 2018
Dr. Jochen Schwenk will give a talk on "Affinity-based assays for biomarkers of the plasma proteome", at the 14th Annual Workshop of Biofilms - Research Center for Biointerfaces, which focuses on Biomarkers - methods and technology, held at Malmö University.Programme
The 13th International Conference on Genomics
October 24, 2018 - October 28, 2018
Mathias Uhlen will present "The creation of a mammalian protein brain atlas" at the 13th International Conference on Genomics taking place in Shenzhen, China. His talk is scheduled at 15.20 on October 26. Programme
The 5th Annual Science Meeting of BioProNET
October 10, 2018 - October 11, 2018
The Secretome and the Human Protein AtlasOn October 10-11 the yearly scientific meeting of BioProNet will take place in London. During this meeting Sophia Hober will present recent results from the Secretome project and the Human Protein Atlas. BioProNET is a UK-based network that focuses on enhancing the position of the UK in the discovery, design and manufacturing of biopharmaceuticals.Programme
Cell heterogeneity & tissue architecture
October 10, 2018 - October 14, 2018
Dr Cecilia Lindskog will participate in the 118th International Titisee Conference, 10-14th of October, Germany, with focus on Cell heterogeneity & tissue architecture. She will give a presentation on "Integration of transcriptomics and antibody-based proteomics for exploration of cell type-specific expression patterns".Information
September 30, 2018 - October 3, 2018
HPA Presence at HUPO 2018On Sunday Sept 30 (11am-12pm), Jochen Schwenk will be hosting a session on Antibody Validation with talks from Jochen Schwenk (Validation pillars), Cecilia Lindskog Bergström (Validation in HPA), Heng Zhu (John's Hopkins), Lydie Lane (Swiss Institute of Bioinformatics) and Cristina Al-Khalili Szigyarto (Antibodypedia).
Monday October 1:At 11.58 am Cristina Al-Khalili Szigyarto will present "Antibodypedia - an open access resource of validated antibodies" during the Session: Affinity, Proximity, & Spatial Proteomics.
Wednesday October 3: Ragna Häussler will give a talk on "Elucidating changes in plasma protein profiles related to bariatric surgery: an IMI DIRECT study." during the session on Metabolism (2.00 pm - 3.50 pm).During the session Neurodegenerative Diseases, Peter Nilsson presents "Autoantigen Anoctamin 2 associates with increased risk for multiple sclerosis".At 10.30 am Emma Lundberg will present "Dissecting the spatiotemporal subcellular distribution of the human proteome". (Session: Single Cell Proteomics)At 14.30 pm Cecilia Lindskog Bergström will present "Integrated omics for spatial mapping of the human proteome - understanding the molecular repertoire in health and disease". (Session: HPP: Unravelling Tissue Pathology Through Cell Mapping)Program Overview
3rd International Antibody Validation Meeting
September 20, 2018 - September 21, 2018
On September 20th, at 10 am, Mathias Uhlén will give a talk on "Enhanced validation of antibodies for research applications". The meeting is held at Chancellors' Building at the University of Bath Claverton road campus.
Subcellular Mapping of the Human Proteome
September 18, 2018, 5:00pm CEST
Xtalks webinar with Charlotte Stadler, PhD.
Researchers and drug developers need reliable information on protein expression throughout the body. This webinar will focus on the subcellular mapping of the human proteome within The Human Protein Atlas project and how to make use of the data from the open access Human Protein Atlas database.
September 13, 2018 - September 15, 2018
On September 14, at 10.00, Emma Lundberg will speak at the Gather 2018 Festival in Stockholm. The session is called "Hacking the Human", addressing the issue "What will it mean to be human when our DNA can be edited, our illnesses cured and our abilities boosted?"Programme
Therapeutics for Immuno-Oncology
September 13, 2018 - September 13, 2018
The 5th Korean-Sweden Collaboration Symposium will be held at the Center for Advancing Cancer Therapeutics at the Asan Medical Center in Seoul , South Korea. The focus will be on novel drug development, immuno-oncology platforms and immuno-oncology therapeutics with the title "Therapeutics for Immuno-Oncology and Beyond".Prof Mathias Uhlen, Director of the Human Protein Atlas program, will open the meeting with a lecture on "The Human Protein Atlas - implications for human biology and drug development". Prof Fredrik Ponten, Director of the Pathology Atlas program, will focus on the Tissue and Pathology Atlas in his lecture on "The Human Pathology Atlas".
European Congress of Pathology
September 8, 2018 - September 12, 2018
Tissue Atlas Director Cecilia Lindskog is invited speaker at the 30th European Congress of Pathology, Bilbao, Spain. On Wednesday, September 12 at 11 am she will present the Human Protein Atlas and the use of archived biobank tissue for research.Online programme, goto SY-29
SLAS Europe 2018
June 27, 2018 - June 29, 2018
On Wednesday June 27, at 11:45, Mathias Uhlen will be the keynote speaker at SLAS Europe 2018, "Transforming research" in Brussels. Programme
XII EuPA Congress
June 16, 2018 - June 20, 2018
On Tuesday June 19, at 16:45, Jochen Schwenk will present "An update on the Human Plasma Proteome" at the XII EuPA Congress - Translating genomes into biological functions - that will take place in Santiago de Compostela (Spain) on June 16-20, 2018. Programme
Big Data in Biotechnology and Biomedicine
May 31, 2018 - June 1, 2018
The Danish Biotechnology Society, together with IDA Bioteknologi, host a conference on Big Data in Biotechnology and Biomedicine. On May 31st, Mathias Uhlen will present "The Human Protein Atlas - implications for human biology, drug development and systems medicine". Programme
May 30, 2018 - June 1, 2018
On May 30, at 13:00, Mathias Uhlen will present "The Swedish SCAPIS SciLifeLab Wellness Program (S3WP)" at the Wellcome Genome Campus conference Longitudinal Studies. Final Programme
11th International Congress on Autoimmunity
May 16, 2018 - May 19, 2018
HPA presence at Autoimmunity Congress 2018, 16-20 May
Nine researchers from KTH in Stockholm will present the work of autoimmunity profiling within the Human Protein Atlas at the 11th international congress on Autoimmunity in Lisbon, Portugal, 16-20 May 2018.
With ten submitted abstracts, eight were selected for oral presentations in numerous sessions of the congress, meaning that the Human Protein Atlas will span the schedule of the congress with a significant coverage.
The detailed schedule for HPA oral and poster presentations is found below:
15:30 - 15:40
Jennie Olofsson: Autoantibody Profiling of Amyotrophic Lateral Sclerosis Plasma
Parallel session: Neuronal Autoimmune Diseases
16:15 - 16:20
Cecilia Hellstrõm: Longitudinal Profiling of Autoantibody Repertoires in 99 Healthy Individuals
Short oral discussion 6 - Prediction, Monitoring and Prevention, Precision (Personalized) Medicine in Autoimmunity (Station 2)
08:00 - 18:30
Elisa Pin: Increased Autoantibody Reactivity in Saliva of Young Athletes after Subconcussion
Poster session: Central Nervous System and Autoimmunity: Eye, Smell and Psychiatry
11:20 - 11:30
Anna Mânberg: Profiling the IGG Repertoire in CSF from Patients with Frontotemporal Dementia
Parallel session: Autoimmunity and Psychiatric Diseases
11:30 - 11:40
David Just: Towards Molecular Insights into Psychiatric Disorders Using Affinity Proteomics
Parallel session: Autoimmunity and Psychiatric Diseases
11:20 - 11:30
Ronald Sjõberg: Comprehensive Auto-Antibody Investigation Of Psychiatric Disorder On High-Density Protein Microarray Platforms
Parallel session: Multiplex Diagnostic Techniques and Chips of Autoimmune Diseases
14:40 - 15:00
Lucia Lourido: Circulating Autoantibodies for Prediction of Response to Infliximab in Rheumatoid Arthritis
Parallel session: Theraputical Response with Antibiological Drugs Antibodies
16:05 - 16:10
Elisa Pin: Profiling the Autoantibody Repertoire in Vasculitis
Short oral discussion 18 - Vasculitides, Hormones and Autoimmunity (Station 2)
17:30 - 17:40
Peter Nilsson: Replication and Validation of the Autoantigen Anoctamin 2 Association with Increased Risk for Multiple Sclerosis
Parallel session: Multiple Sclerosis (Ms); What Is New?
08:00 - 18:30
Eni Andersson: Autoantibody Profiling Using High-Density Protein Microarrays
Poster session: Precision (Personalized) Medicine In Autoimmunity
Wellness profiling and the Human Protein Atlas
May 9, 2018, 11:45am CEST
On May 9 Linn Fagerberg will present "Wellness profiling and the Human Protein Atlas" at the SciLifeLab lunch seminar: Cutting-edge technologies in Precision Cancer Medicine at Clarion Hotel Sign. Programme
Cell Culture Engineering XVI
May 6, 2018 - May 11, 2018
Cell Culture Engineering conferences are held bi-annually. On May 6th Prof. Mathias Uhlen will open the conference with a keynote lecture on "The Human Protein Atlas - Implications for Human Biology, Drug Development and Precision Medicine". Final programme
April 11, 2018, 6:00pm CEST
WEBINAR | Addressing the reproducibility crisis: Validating antibodies for life science research
Speakers: Mathias Uhlen and Cecilia Williams
Antibodies are invaluable tools in the life sciences. There are several challenges that must be overcome to validate the specificity and reproducibility of antibody reagents, as emphasized by many publications, including a recent proposal from the International Working Group for Antibody Validation (IWGAV). There are many examples of antibodies with off-target binding leading to erroneous conclusions, some of which will be discussed during this webcast, demonstrating the importance of application-specific validation. Five alternative strategies for enhanced validation of antibodies will be described based on genetic validation, recombinant expression, independent antibodies, orthogonal validation, and capture mass spectrometry validation. Approaches based on these five strategies have been used for streamlined, enhanced validation of more than 10,000 antibodies from more than 30 providers, targeting over 7,000 human proteins as part of the Human Protein Atlas program. The results show a path forward for validating antibodies in an application-specific manner suitable for both providers and users.
During the webinar, viewers will learn about:
- The generation and validation of data used in the Human Protein Atlas
- Problems related to the cross-reactivity of antibodies and the challenges they create for the interpretation of results
- Enhanced validation of antibodies using five application-specific strategies.
Speakers will answer your questions during the live broadcast!
Course in antibody based technologies at Scilifelab April
April 10, 2018 - April 11, 2018
Where: Air and Fire, Scilifelab Solna
When: April 10-11, 2018
Credits: 1 hp
The course will focus on antibody based technologies and describe the possibilities of using these technologies within the facilities at SciLifeLab. Lectures will cover both theoretical and more practical aspects of the different technologies, including the following:
- Tissue fluorescence profiling
- Protein array technologies and suspension bead technologies
- Mass cytometry and flow cytometry
- Immuno capture/immuno precipitation in combination with mass spectrometry
- Proximity ligation assays
Apart from general aspects of the technologies, the course will include project presentations to demonstrate the benefits and possibilities of the technologies in different contexts. Last but not least validation strategies of antibodies for different applications will be covered, as this is of outmost importance for adequate output data.
Please read more and apply through the following link:
Antibody based technologies
Bioprocessing Summit Europe
March 21, 2018 - March 22, 2018
On Thursday March 22nd, Prof Sophia Hober will present "A Protein A-Derived Domain with Calcium-Dependent Affinity for Use in Antibody Purification" at the Cambridge Healthtech Institute's Inaugural "Advances in Recovery and Purification" Programme.
March 11, 2018 - March 14, 2018
The title of 2018 year's US HUPO conference is "Technology accelerating discovery". Dr. Emma Lundberg will hold the closing plenary session, titled "Spatiotemporal proteome organization of the human cell" on March 14. Programme
Proteomics in Cell Biology and Disease Mechanisms
February 28, 2018 - March 2, 2018
The Wellcome Genome Campus organizes the conference Proteomics in Cell Biology and Disease Mechanisms where Dr. Emma Lundberg will present "Dissecting the spatiotemporal subcellular distribution of the human proteome". Her talk is scheduled on March 2. Draft programme
The Human Protein Atlas - implications for human biology and precision medicine
January 25, 2018
Dr Cecilia Lindskog will present the Pathology Atlas, the association of all human genes with patient survival, and other recent milestones and high-profile findings in the Human Protein Atlas project at the 8th Symposium on Pharmaceutical Profiling in Drug Discovery and Development. Venue: The Humanities Theater, English Park Campus, Uppsala University.
Frontiers in Biology
January 24, 2018
Upcoming presentation by Emma Lundberg at Stanford on "Spatial proteomics and the single cell".
Protein A-Based purification of antibodies
January 8, 2018
Prof. Sophia Hober will present the latest advances regarding engineering of protein A, for Ca-mediated purification of antibodies. Her talk is scheduled on January 9, during one of the largest annual events focusing on protein science, the PepTalk conference. "Optimization of an IgG-Binding, Protein A-Based Purification Matrix".
Presentation at Biogenouest network meeting
December 7, 2017
Dr. Cecilia Lindskog Bergström, Director of the Tissue Atlas, will present "The Human Protein Atlas - implications for human biology and precision medicine", at the annual meeting of the Biogenouest network in Nantes, France, this year with the theme "Antibodies used in proteomics".
ASCB/EMBO meeting starts on the 2 of December
December 2, 2017 - December 6, 2017
First joint ASCB/EMBO meeting is organized in Philadelphia in December. Invited talks highlight the value of sharing scientific results through publicly available databases and international co-operations to increase our understanding of cell biology. The Cell Atlas team presents protein atlas, in booth #218.
The HPA at the Image-based Cell Atlas Meeting
October 6, 2017 - November 30, 2017
World-leading scientists summoned to discuss how to map the human cell and promote research on human health and diseases. The meeting emphasised the importance of image-based assays to accomplish such an endeavor.