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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 146.5
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 593.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 186.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 331.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 717.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 742.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 440.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 458
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 48570.5
Min RPKM: 17.7
Std RPKM: 11023.1
Median RPKM: 5664.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
48570.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
42612.7
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
38426.7
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
35331.6
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
35220.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
34502.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
29630.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
28097.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
27954.2
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
26590.0
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
26013.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
26000.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
25002.6
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
24227.9
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
23483.4
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
23461.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
22503.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
22380.0
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
22234.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
21547.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
21264.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
20524.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
20155.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
18601.2
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
18210.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
17792.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
17670.6
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
17597.1
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
17292.2
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
17111.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
16747.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
16713.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
16544.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
16305.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
15991.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
15569.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
15114.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
14393.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
13595.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
13532.1
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
13318.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
13286.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
13109.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
12794.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
12539.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
12299.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
11686.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
11011.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
10082.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
9950.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
9821.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
9032.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
8593.1
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
7032.6
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
6245.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
6229.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
6120.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
6102.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
5857.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
5664.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
4444.2
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
4442.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
4253.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
3661.2
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
3544.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
3351.2
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
3343.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
2980.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
2934.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
2895.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
2677.8
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
2360.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
2213.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
2081.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
2005.8
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
1391.2
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
1384.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
1301.9
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
1277.7
GTEX-R53T-0326-SM-48FEC
50-59 years, female
1234.4
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
1162.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
982.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
908.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
832.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
719.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
628.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
568.1
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
539.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
470.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
457.7
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
404.7
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
352.7
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
256.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
242.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
216.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
201.0
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
200.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
193.9
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
181.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
179.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
122.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
111.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
97.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
92.9
GTEX-RN64-1826-SM-48FDV
50-59 years, male
87.8
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
77.7
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
67.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
59.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
55.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
53.3
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
48.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
43.7
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
35.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
31.3
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
29.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
24.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
20.9
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
18.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
17.7
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.