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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 94.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 22.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 45.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 601.9
Min RPKM: 2.8
Std RPKM: 84.6
Median RPKM: 67.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
601.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
511.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
424.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
346.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
300.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
297.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
293.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
291.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
270.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
250.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
249.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
244.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
237.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
236.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
232.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
229.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
208.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
207.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
198.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
189.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
188.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
186.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
180.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
178.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
175.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
173.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
171.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
164.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
153.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
152.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
150.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
147.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
147.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
142.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
142.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
141.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
141.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
141.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
138.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
132.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
130.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
130.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
130.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
128.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
123.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
122.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
122.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
122.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
121.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
121.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
121.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
121.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
118.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
117.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
115.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
113.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
113.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
112.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
112.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
111.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
111.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
111.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
109.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
108.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
106.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
106.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
105.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
105.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
105.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
104.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
101.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
99.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
97.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
94.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
94.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
93.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
93.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
92.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
91.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
89.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
89.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
88.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
87.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
86.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
84.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
84.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
83.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
83.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
82.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
81.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
80.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
80.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
80.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
78.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
76.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
76.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
76.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
74.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
73.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
71.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
70.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
70.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
69.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
69.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
68.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
67.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
67.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
67.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
65.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
63.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
63.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
63.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
61.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
60.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
58.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
57.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
57.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
56.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
56.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
55.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
55.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
54.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
54.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
54.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
52.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
52.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
52.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
51.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
51.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
51.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
50.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
50.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
50.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
49.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
48.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
48.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
48.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
48.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
47.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
47.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
47.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
43.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
43.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
41.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
41.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
41.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
40.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
39.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
38.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
37.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
36.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
36.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
35.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
35.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
34.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
34.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
34.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
32.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
32.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
32.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
32.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
31.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
30.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
30.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
30.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
29.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
29.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
29.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
28.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
28.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
27.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
27.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
25.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
25.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
24.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
24.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
24.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
21.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
20.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
20.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
19.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
19.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
18.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
18.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
17.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
17.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
17.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
16.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
16.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
15.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
15.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
15.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
15.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
14.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
13.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
12.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
11.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
11.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
11.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
10.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
10.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
9.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
9.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
9.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
8.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
8.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
7.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
6.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
6.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
6.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
5.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
5.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
4.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
2.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.