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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1081.8
Min RPKM: 221.0
Std RPKM: 153.7
Median RPKM: 385.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1081.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
953.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
824.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
796.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
787.7
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
733.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
692.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
646.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
629.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
611.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
605.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
600.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
596.0
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
563.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
555.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
537.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
513.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
510.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
510.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
496.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
488.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
487.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
486.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
484.1
GTEX-S32W-1226-SM-4AD67
50-59 years, female
468.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
468.4
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
466.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
447.5
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
441.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
438.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
435.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
421.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
417.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
409.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
405.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
403.7
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
403.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
403.2
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
402.2
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
398.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
397.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
394.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
394.0
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
393.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
391.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
389.5
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
388.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
388.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
385.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
385.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
383.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
381.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
380.1
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
379.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
377.3
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
370.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
369.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
369.1
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
366.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
364.0
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
357.2
GTEX-11I78-1926-SM-59878
50-59 years, female
352.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
351.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
351.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
351.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
340.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
324.0
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
323.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
322.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
322.4
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
319.6
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
319.2
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
318.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
318.3
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
317.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
311.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
309.6
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
309.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
306.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
305.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
301.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
295.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
295.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
294.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
289.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
279.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
274.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
268.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
267.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
264.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
259.9
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
259.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
256.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
246.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
238.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
235.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
221.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.