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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 78.7
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 27.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 32
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 78.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 72.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 93.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 79.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 174.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 125.1
Min RPKM: 2.5
Std RPKM: 31.5
Median RPKM: 59.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
125.1
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
123.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
123.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
121.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
115.6
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
115.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
113.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
113.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
110.6
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
109.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
101.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
101.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
99.3
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
94.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
93.6
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
91.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
90.9
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
90.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
89.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
89.4
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
89.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
85.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
84.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
83.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
82.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
82.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
82.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
81.7
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
81.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
81.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
80.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
80.0
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
79.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
79.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
79.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
78.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
76.8
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
76.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
75.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
75.6
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
75.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
74.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
74.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
74.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
73.3
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
72.0
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
71.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
70.5
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
70.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
69.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
68.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
68.1
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
64.8
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
63.6
GTEX-RU72-1426-SM-46MUF
50-59 years, female
63.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
62.4
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
62.2
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
60.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
60.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
59.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
58.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
58.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
57.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
57.0
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
55.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
54.9
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
52.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
50.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
49.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
49.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
49.3
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
49.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
48.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
47.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
46.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
45.3
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
43.6
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
42.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
42.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
42.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
41.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
38.9
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
38.7
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
35.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
34.9
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
34.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
33.5
GTEX-Q734-0326-SM-48U15
40-49 years, female
32.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
31.8
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
31.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
30.7
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
30.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
30.2
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
30.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
28.4
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
26.5
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
26.2
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
25.1
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
24.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
23.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
23.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
22.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
22.3
GTEX-S33H-1626-SM-4AD68
30-39 years, male
22.0
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
19.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
18.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
16.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
16.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
14.2
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
13.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
10.0
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
8.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
7.2
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
6.0
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
5.9
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
5.6
GTEX-S32W-1926-SM-4AD63
50-59 years, female
3.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
3.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
2.5
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.