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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2144.4
Min RPKM: 689.0
Std RPKM: 303.8
Median RPKM: 1234.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
2144.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1952.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1946.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1929.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1929.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1885.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1822.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1810.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1796.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1786.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1774.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1757.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1749.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1715.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1668.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1627.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1602.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1557.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1550.8
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1479.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1450.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1420.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1418.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1417.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1414.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1352.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1343.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1342.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1340.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1331.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1330.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1324.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1323.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1323.6
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1322.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1322.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1316.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1313.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1307.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
1302.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1295.8
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1281.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1274.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1271.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1260.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1246.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1242.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1239.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1234.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1229.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1216.7
GTEX-11I78-1926-SM-59878
50-59 years, female
1212.7
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1212.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1198.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1165.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1163.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1159.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1158.1
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1157.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1135.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1134.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1133.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1131.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1127.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1123.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1116.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1105.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1102.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1101.6
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1096.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1089.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1077.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1075.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1074.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1073.3
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1053.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1044.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1043.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1021.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1013.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1006.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
978.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
976.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
974.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
964.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
957.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
953.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
938.3
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
933.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
915.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
887.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
885.6
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
878.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
827.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
810.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
782.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
689.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.