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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 399.5
Min RPKM: 85.6
Std RPKM: 70.5
Median RPKM: 190.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
399.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
391.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
385.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
361.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
358.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
348.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
333.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
327.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
302.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
299.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
299.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
289.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
286.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
284.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
282.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
281.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
279.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
278.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
275.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
268.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
267.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
265.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
264.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
263.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
253.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
242.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
240.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
239.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
237.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
222.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
219.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
215.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
213.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
209.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
206.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
205.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
205.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
202.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
201.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
199.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
198.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
198.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
198.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
195.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
195.0
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
193.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
190.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
189.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
187.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
186.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
185.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
185.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
185.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
185.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
180.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
180.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
178.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
176.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
175.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
172.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
169.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
166.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
166.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
165.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
163.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
163.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
162.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
160.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
158.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
155.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
154.8
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
153.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
150.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
148.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
147.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
144.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
143.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
140.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
138.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
137.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
136.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
133.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
133.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
132.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
130.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
127.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
127.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
126.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
125.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
118.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
116.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
108.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
96.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
85.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.