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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 397.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 187.8
Min RPKM: 63.3
Std RPKM: 24.6
Median RPKM: 110.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
187.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
180.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
172.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
172.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
157.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
152.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
152.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
151.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
149.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
147.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
144.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
144.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
142.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
142.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
141.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
141.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
141.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
141.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
136.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
136.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
135.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
135.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
135.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
133.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
132.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
131.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
131.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
131.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
130.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
130.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
128.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
126.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
125.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
125.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
124.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
124.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
122.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
122.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
122.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
122.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
121.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
121.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
120.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
120.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
118.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
116.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
116.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
116.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
115.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
115.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
114.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
114.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
113.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
112.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
111.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
111.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
111.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
110.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
110.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
110.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
109.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
108.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
108.3
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
108.2
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
108.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
107.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
107.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
106.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
105.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
105.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
105.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
105.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
104.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
104.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
104.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
103.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
102.1
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
101.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
101.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
101.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
100.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
100.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
100.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
100.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
100.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
98.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
98.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
97.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
97.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
96.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
94.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
93.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
93.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
92.2
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
91.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
90.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
90.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
88.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
86.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
86.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
85.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
84.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
83.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
82.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
80.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
78.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
78.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
76.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
71.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
67.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
67.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
64.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
64.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
63.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 170.0
Samples: 108
Max RPKM: 321.4
Min RPKM: 88.5
Std RPKM: 39.7
Median RPKM: 163.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
321.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
300.8
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
275.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
271.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
260.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
244.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
238.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
234.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
232.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
218.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
218.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
210.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
209.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
208.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
207.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
205.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
205.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
203.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
200.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
198.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
198.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
196.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
193.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
192.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
191.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
188.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
188.0
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
187.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
187.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
186.7
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
185.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
184.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
184.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
182.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
182.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
181.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
175.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
173.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
173.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
173.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
173.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
172.5
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
172.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
171.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
169.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
168.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
168.6
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
168.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
168.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
168.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
168.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
167.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
165.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
164.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
162.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
162.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
161.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
160.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
160.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
160.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
159.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
158.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
157.1
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
156.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
155.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
155.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
153.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
153.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
153.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
152.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
152.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
150.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
149.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
149.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
149.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
147.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
147.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
147.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
146.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
146.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
146.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
145.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
144.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
142.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
141.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
141.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
141.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
140.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
140.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
137.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
136.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
136.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
135.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
134.6
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
133.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
131.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
130.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
129.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
128.9
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
127.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
127.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
126.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
118.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
113.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
100.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
98.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
95.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
88.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.