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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 368.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 237.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 192.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 400.3
Min RPKM: 114.8
Std RPKM: 50.5
Median RPKM: 230.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
400.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
398.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
387.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
376.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
371.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
356.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
355.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
330.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
326.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
323.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
320.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
318.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
317.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
314.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
313.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
310.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
310.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
304.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
302.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
300.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
298.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
298.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
298.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
293.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
292.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
289.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
289.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
288.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
287.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
287.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
284.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
283.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
282.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
282.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
280.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
280.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
279.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
277.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
275.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
275.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
275.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
272.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
270.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
270.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
270.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
269.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
268.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
267.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
266.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
264.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
264.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
264.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
264.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
263.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
261.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
261.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
259.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
258.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
258.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
257.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
257.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
256.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
256.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
256.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
255.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
255.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
254.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
252.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
251.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
251.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
251.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
250.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
247.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
247.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
247.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
247.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
246.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
245.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
245.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
245.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
245.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
243.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
243.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
242.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
241.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
240.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
240.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
239.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
237.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
237.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
236.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
235.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
235.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
235.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
235.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
235.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
234.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
233.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
232.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
232.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
232.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
231.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
231.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
231.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
231.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
231.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
230.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
229.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
229.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
228.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
227.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
227.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
226.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
225.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
224.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
224.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
222.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
222.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
221.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
220.6
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
219.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
219.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
219.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
218.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
217.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
217.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
217.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
216.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
216.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
216.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
216.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
216.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
216.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
215.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
215.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
211.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
211.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
211.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
210.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
210.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
209.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
208.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
207.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
207.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
205.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
205.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
205.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
205.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
203.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
203.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
202.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
202.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
202.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
201.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
201.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
201.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
199.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
199.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
198.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
197.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
196.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
193.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
193.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
193.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
193.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
192.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
192.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
190.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
190.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
190.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
189.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
187.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
187.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
186.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
186.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
185.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
185.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
185.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
184.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
184.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
184.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
182.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
182.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
182.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
181.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
181.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
179.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
179.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
176.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
176.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
175.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
174.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
173.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
170.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
170.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
169.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
168.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
167.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
167.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
166.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
165.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
164.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
164.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
163.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
162.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
162.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
160.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
159.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
158.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
153.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
147.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
139.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
131.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
114.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.