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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 424.6
Min RPKM: 24.7
Std RPKM: 97.4
Median RPKM: 156.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
424.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
384.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
363.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
339.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
317.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
311.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
307.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
304.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
300.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
298.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
287.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
284.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
276.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
271.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
266.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
258.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
257.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
254.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
252.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
251.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
249.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
241.5
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
231.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
231.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
227.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
222.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
216.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
210.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
210.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
209.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
205.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
196.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
195.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
193.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
191.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
187.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
186.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
185.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
184.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
182.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
178.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
175.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
170.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
166.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
165.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
163.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
159.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
153.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
143.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
138.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
137.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
136.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
124.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
121.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
119.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
117.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
107.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
101.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
98.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
97.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
88.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
84.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
83.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
81.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
79.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
78.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
75.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
71.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
69.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
68.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
64.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
62.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
60.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
59.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
59.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
58.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
57.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
57.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
53.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
52.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
50.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
49.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
45.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
43.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
41.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
39.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
38.5
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
38.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
36.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
36.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
34.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
29.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
28.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
24.7
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.