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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 315.2
Min RPKM: 16.1
Std RPKM: 78.6
Median RPKM: 154.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
315.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
312.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
306.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
301.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
292.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
291.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
283.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
281.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
275.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
274.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
270.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
269.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
268.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
267.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
259.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
255.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
248.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
247.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
246.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
245.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
238.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
236.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
236.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
231.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
221.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
220.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
218.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
217.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
213.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
213.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
212.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
211.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
210.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
209.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
208.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
204.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
201.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
197.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
197.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
197.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
196.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
195.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
194.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
194.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
189.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
188.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
188.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
187.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
184.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
184.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
182.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
181.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
180.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
173.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
173.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
162.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
161.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
161.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
154.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
150.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
150.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
148.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
147.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
147.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
142.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
140.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
139.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
138.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
136.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
134.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
132.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
129.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
122.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
121.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
118.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
116.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
116.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
115.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
114.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
113.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
112.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
108.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
105.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
102.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
100.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
98.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
93.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
90.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
86.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
86.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
81.3
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
72.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
71.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
70.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
70.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
69.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
68.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
68.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
67.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
63.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
62.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
58.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
58.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
55.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
53.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
52.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
47.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
47.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
45.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
44.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
35.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
34.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
34.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
31.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
30.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
30.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
16.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.