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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 386.7
Min RPKM: 143.5
Std RPKM: 53.0
Median RPKM: 238.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
386.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
375.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
363.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
359.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
344.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
333.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
330.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
328.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
316.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
315.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
314.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
308.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
308.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
305.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
304.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
300.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
297.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
297.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
296.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
292.3
GTEX-R55G-0226-SM-48FEI
40-49 years, female
292.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
289.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
288.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
286.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
285.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
280.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
279.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
277.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
275.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
274.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
271.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
270.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
269.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
268.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
262.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
259.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
255.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
254.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
253.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
252.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
252.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
252.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
252.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
247.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
246.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
246.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
245.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
244.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
243.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
243.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
242.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
238.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
238.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
234.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
233.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
232.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
231.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
230.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
229.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
222.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
221.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
221.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
220.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
218.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
217.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
216.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
216.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
216.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
216.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
215.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
213.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
212.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
212.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
210.4
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
209.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
208.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
207.3
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
205.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
201.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
199.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
197.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
197.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
194.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
193.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
193.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
192.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
192.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
190.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
189.8
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
189.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
182.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
182.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
181.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
177.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
176.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
175.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
174.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
169.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
167.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
165.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
161.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
152.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
147.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
143.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.