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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 477.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 418.0
Min RPKM: 132.6
Std RPKM: 51.0
Median RPKM: 267.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
418.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
416.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
412.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
394.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
373.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
371.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
353.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
345.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
344.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
339.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
331.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
329.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
329.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
322.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
322.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
322.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
318.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
317.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
316.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
307.0
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
305.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
305.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
302.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
301.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
299.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
298.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
298.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
298.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
296.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
296.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
296.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
295.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
294.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
293.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
293.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
292.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
289.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
289.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
287.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
286.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
279.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
277.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
276.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
275.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
274.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
274.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
274.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
274.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
274.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
274.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
273.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
271.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
271.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
270.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
269.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
269.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
267.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
266.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
265.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
264.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
263.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
262.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
260.5
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
256.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
256.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
255.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
255.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
253.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
253.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
253.2
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
251.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
251.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
250.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
249.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
247.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
246.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
244.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
242.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
242.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
241.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
240.3
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
239.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
238.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
238.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
238.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
238.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
236.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
234.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
233.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
232.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
230.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
229.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
228.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
227.9
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
227.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
226.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
224.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
219.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
218.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
211.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
207.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
203.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
199.7
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
198.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
197.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
197.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
196.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
193.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
192.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
189.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
189.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
189.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
180.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
132.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 313.8
Samples: 108
Max RPKM: 674.8
Min RPKM: 147.2
Std RPKM: 75.8
Median RPKM: 301.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
674.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
565.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
504.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
498.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
495.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
481.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
435.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
432.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
411.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
407.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
405.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
396.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
394.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
384.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
375.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
372.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
365.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
357.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
355.2
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
354.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
354.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
350.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
348.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
347.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
345.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
342.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
341.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
335.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
333.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
331.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
331.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
329.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
326.4
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
326.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
325.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
324.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
321.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
320.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
320.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
316.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
316.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
316.4
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
313.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
313.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
310.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
309.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
309.5
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
309.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
303.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
302.9
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
302.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
302.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
302.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
301.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
300.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
300.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
299.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
298.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
296.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
295.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
294.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
292.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
291.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
290.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
290.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
290.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
289.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
289.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
288.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
288.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
288.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
287.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
286.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
285.5
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
283.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
282.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
282.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
280.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
275.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
275.2
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
275.2
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
273.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
273.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
272.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
263.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
263.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
261.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
260.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
259.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
258.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
258.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
252.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
246.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
246.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
242.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
241.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
241.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
238.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
235.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
232.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
232.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
217.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
217.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
211.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
210.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
209.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
169.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
147.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.