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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 767.0
Min RPKM: 82.9
Std RPKM: 80.6
Median RPKM: 226.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
767.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
457.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
374.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
362.6
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
354.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
331.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
320.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
310.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
306.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
296.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
292.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
291.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
290.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
290.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
289.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
284.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
283.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
283.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
282.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
282.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
281.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
280.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
280.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
280.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
279.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
275.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
269.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
269.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
267.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
266.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
264.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
263.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
262.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
261.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
258.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
257.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
257.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
250.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
250.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
250.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
246.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
246.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
245.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
243.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
241.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
239.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
239.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
237.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
237.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
237.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
235.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
235.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
235.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
232.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
232.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
230.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
229.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
229.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
226.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
222.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
222.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
220.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
218.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
217.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
217.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
216.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
215.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
215.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
214.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
213.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
210.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
210.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
210.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
209.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
205.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
204.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
200.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
198.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
196.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
196.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
196.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
193.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
192.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
191.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
186.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
186.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
184.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
182.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
181.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
180.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
179.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
179.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
177.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
174.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
170.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
170.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
170.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
164.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
163.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
159.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
158.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
154.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
150.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
148.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
133.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
131.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
126.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
126.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
122.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
114.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
113.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
113.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
113.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
106.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
91.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
86.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
82.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.