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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 695.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 357.9
Min RPKM: 147.9
Std RPKM: 35.9
Median RPKM: 245.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
357.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
350.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
327.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
301.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
301.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
298.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
295.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
295.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
293.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
291.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
287.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
285.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
284.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
283.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
283.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
281.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
281.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
281.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
278.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
278.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
278.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
277.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
276.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
276.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
275.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
273.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
269.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
268.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
267.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
267.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
265.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
264.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
263.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
262.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
262.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
261.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
261.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
257.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
255.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
255.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
254.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
254.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
254.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
253.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
253.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
252.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
251.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
249.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
249.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
249.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
249.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
248.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
248.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
248.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
247.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
246.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
245.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
245.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
244.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
244.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
243.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
243.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
242.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
242.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
241.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
240.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
239.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
237.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
237.0
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
237.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
236.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
236.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
236.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
235.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
235.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
234.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
232.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
228.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
226.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
226.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
226.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
225.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
225.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
225.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
224.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
222.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
221.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
220.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
219.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
219.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
218.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
217.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
215.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
213.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
212.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
212.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
208.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
205.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
205.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
204.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
204.0
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
203.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
201.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
201.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
200.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
198.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
191.7
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
186.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
186.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
185.4
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
176.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
166.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
150.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
147.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 265.3
Samples: 108
Max RPKM: 497.0
Min RPKM: 114.0
Std RPKM: 49.9
Median RPKM: 263.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
497.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
444.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
371.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
335.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
331.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
326.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
324.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
318.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
316.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
313.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
312.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
311.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
310.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
309.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
308.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
308.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
306.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
304.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
304.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
303.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
302.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
300.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
300.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
297.7
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
296.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
295.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
295.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
290.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
289.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
289.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
286.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
286.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
286.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
286.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
285.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
285.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
285.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
282.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
280.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
277.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
276.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
276.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
272.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
272.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
271.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
271.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
271.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
271.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
268.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
267.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
265.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
265.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
264.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
263.9
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
263.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
262.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
258.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
258.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
257.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
257.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
257.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
255.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
255.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
255.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
253.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
252.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
252.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
250.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
249.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
248.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
247.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
247.8
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
246.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
246.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
245.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
245.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
245.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
245.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
244.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
244.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
243.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
242.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
238.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
238.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
236.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
234.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
232.8
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
228.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
226.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
226.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
225.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
221.9
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
221.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
214.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
214.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
214.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
212.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
211.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
205.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
204.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
199.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
195.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
182.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
175.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
174.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
167.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
163.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
114.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.