We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1764.2
Min RPKM: 8.8
Std RPKM: 370.0
Median RPKM: 273.7
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
1764.2
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
1451.6
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
1365.8
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
1113.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
1097.0
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
985.5
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
953.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
938.8
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
921.7
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
919.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
914.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
864.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
826.7
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
820.4
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
818.5
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
802.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
785.8
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
781.3
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
755.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
711.2
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
706.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
672.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
670.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
668.9
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
649.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
606.3
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
585.8
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
564.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
564.7
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
562.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
557.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
556.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
550.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
506.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
495.8
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
455.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
412.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
379.3
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
376.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
363.6
GTEX-QCQG-1226-SM-48U23
50-59 years, female
315.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
314.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
305.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
300.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
297.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
287.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
283.5
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
275.1
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
272.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
271.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
269.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
236.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
225.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
218.1
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
208.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
207.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
195.0
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
190.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
186.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
155.8
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
154.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
138.0
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
136.4
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
132.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
129.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
126.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
118.3
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
114.9
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
111.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
110.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
101.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
94.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
88.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
81.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
77.5
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
73.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
69.6
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
68.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
66.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
62.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
59.7
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
59.0
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
51.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
45.2
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
38.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
38.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
37.7
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
35.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
25.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
25.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
22.9
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
18.7
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
14.1
GTEX-S341-1226-SM-4AD5S
40-49 years, female
14.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
12.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
8.8
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.