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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1018.9
Min RPKM: 87.0
Std RPKM: 183.5
Median RPKM: 374.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1018.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
926.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
883.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
802.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
783.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
715.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
670.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
669.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
651.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
649.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
648.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
616.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
601.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
583.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
569.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
568.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
554.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
547.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
545.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
532.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
527.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
525.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
493.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
491.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
489.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
481.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
466.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
461.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
461.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
460.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
456.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
454.2
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
454.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
453.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
452.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
431.5
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
429.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
422.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
422.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
420.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
417.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
401.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
393.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
387.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
385.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
380.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
379.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
369.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
365.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
358.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
354.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
353.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
345.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
341.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
338.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
322.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
310.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
309.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
308.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
306.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
305.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
299.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
297.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
297.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
290.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
289.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
282.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
280.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
278.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
274.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
271.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
268.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
267.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
262.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
252.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
252.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
244.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
241.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
231.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
229.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
220.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
215.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
210.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
199.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
190.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
184.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
182.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
182.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
152.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
151.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
144.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
133.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
113.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
87.0
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.