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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 921.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 899.1
Min RPKM: 119.5
Std RPKM: 143.0
Median RPKM: 401.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
899.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
802.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
763.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
760.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
695.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
674.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
651.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
650.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
650.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
646.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
635.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
633.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
623.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
619.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
597.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
586.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
583.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
573.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
569.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
568.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
568.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
564.0
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
546.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
532.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
531.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
506.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
487.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
486.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
486.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
475.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
475.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
472.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
470.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
467.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
465.3
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
463.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
462.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
462.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
454.1
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
448.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
444.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
442.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
438.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
437.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
437.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
434.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
432.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
427.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
426.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
420.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
420.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
413.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
409.9
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
407.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
405.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
403.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
402.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
401.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
400.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
400.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
392.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
390.3
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
386.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
384.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
381.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
378.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
378.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
374.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
374.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
373.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
373.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
370.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
369.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
367.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
365.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
359.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
357.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
357.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
350.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
347.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
347.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
338.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
332.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
332.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
331.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
330.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
329.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
328.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
325.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
322.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
322.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
320.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
307.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
304.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
303.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
298.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
297.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
297.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
287.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
287.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
284.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
266.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
250.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
246.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
240.4
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
234.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
217.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
209.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
205.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
199.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
165.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
159.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
146.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
119.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 470.7
Samples: 108
Max RPKM: 1262.4
Min RPKM: 164.3
Std RPKM: 185.4
Median RPKM: 435.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
1262.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
1023.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
966.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
855.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
827.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
824.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
793.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
771.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
761.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
745.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
744.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
739.7
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
738.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
710.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
696.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
691.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
638.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
631.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
625.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
611.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
601.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
598.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
591.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
556.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
539.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
536.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
528.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
519.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
516.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
514.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
510.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
506.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
506.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
505.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
502.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
496.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
495.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
488.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
485.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
485.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
483.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
480.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
471.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
470.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
465.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
462.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
459.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
451.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
450.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
447.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
446.2
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
440.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
439.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
436.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
434.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
433.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
433.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
429.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
426.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
423.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
417.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
416.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
414.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
410.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
406.5
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
405.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
394.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
387.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
386.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
381.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
380.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
377.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
373.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
371.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
369.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
368.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
366.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
365.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
363.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
361.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
358.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
356.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
354.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
348.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
344.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
342.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
339.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
339.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
335.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
316.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
307.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
307.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
298.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
294.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
292.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
287.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
287.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
276.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
269.2
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
245.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
237.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
235.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
233.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
228.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
213.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
190.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
174.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
164.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.