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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 3569.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4795.1
Min RPKM: 435.8
Std RPKM: 559.1
Median RPKM: 976.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
4795.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
3066.3
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
2535.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
2530.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
2183.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
1957.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
1889.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
1874.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
1853.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
1841.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
1691.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
1658.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
1656.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
1646.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
1641.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
1602.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
1549.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
1536.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
1523.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
1517.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
1513.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
1505.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
1485.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
1469.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
1454.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
1365.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
1287.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
1282.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
1265.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
1240.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
1215.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
1204.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
1195.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
1191.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
1185.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
1183.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
1180.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
1170.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
1168.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
1160.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
1156.0
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
1124.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
1123.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
1108.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
1072.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
1062.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
1060.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
1051.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
1036.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
1035.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
1007.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
1002.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
1002.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
991.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
989.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
982.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
978.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
974.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
971.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
966.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
965.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
953.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
950.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
948.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
930.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
924.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
921.0
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
917.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
916.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
898.0
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
894.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
879.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
876.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
875.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
872.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
859.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
859.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
855.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
847.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
838.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
813.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
811.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
807.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
801.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
801.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
797.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
790.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
786.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
785.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
782.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
771.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
765.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
761.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
754.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
743.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
742.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
739.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
719.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
718.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
711.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
708.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
708.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
707.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
697.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
684.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
677.3
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
654.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
650.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
650.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
647.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
599.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
581.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
465.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
435.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 1145.3
Samples: 108
Max RPKM: 3126.7
Min RPKM: 497.9
Std RPKM: 501.7
Median RPKM: 983.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
3126.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
2946.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
2626.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
2411.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
2183.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
2096.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
2014.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
2008.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
1978.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
1966.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
1914.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
1900.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
1779.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
1725.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
1668.5
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
1640.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
1596.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
1584.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
1459.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
1406.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
1386.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
1386.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
1380.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
1365.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
1351.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
1329.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
1307.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
1302.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
1301.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
1299.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
1291.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
1290.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
1288.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
1277.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
1246.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
1223.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
1216.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
1209.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
1172.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
1161.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
1138.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
1138.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
1123.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
1113.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
1108.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
1089.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
1087.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
1081.2
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
1069.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
1060.9
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
1045.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
1019.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
1000.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
983.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
983.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
981.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
969.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
966.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
960.9
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
941.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
936.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
922.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
920.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
920.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
919.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
918.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
917.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
915.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
913.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
904.9
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
904.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
893.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
890.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
889.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
881.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
870.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
865.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
860.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
846.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
843.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
839.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
831.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
824.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
817.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
788.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
787.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
775.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
751.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
743.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
736.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
735.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
731.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
721.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
714.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
703.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
683.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
669.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
630.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
617.7
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
592.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
590.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
579.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
570.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
555.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
549.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
523.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
510.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
497.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.