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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 937.4
Min RPKM: 183.3
Std RPKM: 146.2
Median RPKM: 343.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
937.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
825.0
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
731.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
702.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
700.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
695.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
689.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
673.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
651.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
648.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
605.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
603.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
594.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
564.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
541.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
519.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
511.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
499.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
486.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
482.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
480.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
479.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
469.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
448.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
444.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
441.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
431.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
429.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
424.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
423.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
418.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
416.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
409.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
407.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
405.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
396.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
390.9
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
390.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
390.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
389.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
389.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
385.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
384.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
382.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
379.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
372.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
371.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
370.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
365.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
363.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
345.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
344.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
343.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
342.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
338.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
335.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
327.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
325.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
322.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
320.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
319.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
318.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
317.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
312.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
309.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
309.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
304.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
302.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
297.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
296.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
294.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
294.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
291.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
291.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
289.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
285.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
284.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
282.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
282.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
280.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
280.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
279.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
274.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
271.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
267.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
265.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
263.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
260.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
258.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
256.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
251.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
250.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
247.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
246.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
245.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
243.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
243.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
238.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
227.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
211.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
206.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
189.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
185.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
183.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.