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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 845.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 910.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 214.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 730.7
Min RPKM: 112.8
Std RPKM: 102.2
Median RPKM: 250.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
730.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
622.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
614.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
610.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
580.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
571.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
569.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
564.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
550.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
529.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
507.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
506.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
473.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
467.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
463.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
451.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
442.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
438.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
434.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
423.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
417.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
403.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
399.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
396.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
377.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
376.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
368.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
363.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
361.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
358.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
357.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
355.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
352.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
349.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
346.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
344.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
341.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
341.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
339.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
338.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
335.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
335.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
331.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
330.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
329.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
327.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
325.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
322.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
316.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
308.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
307.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
305.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
304.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
303.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
303.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
302.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
302.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
301.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
299.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
298.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
297.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
295.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
295.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
294.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
294.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
294.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
294.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
292.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
285.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
285.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
284.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
284.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
282.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
282.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
282.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
281.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
277.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
277.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
275.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
273.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
272.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
271.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
270.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
268.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
268.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
268.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
268.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
268.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
267.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
266.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
265.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
264.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
263.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
262.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
262.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
259.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
259.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
259.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
259.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
257.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
257.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
256.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
253.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
252.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
251.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
251.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
250.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
250.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
249.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
249.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
248.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
247.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
247.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
247.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
245.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
245.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
244.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
244.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
243.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
241.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
241.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
241.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
239.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
238.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
238.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
238.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
236.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
236.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
236.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
233.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
233.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
233.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
232.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
232.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
232.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
232.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
229.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
229.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
229.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
228.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
228.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
227.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
225.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
224.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
223.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
222.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
221.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
220.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
219.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
219.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
218.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
218.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
216.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
216.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
215.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
215.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
214.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
211.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
209.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
209.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
207.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
206.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
206.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
205.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
205.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
205.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
205.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
204.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
204.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
203.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
203.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
201.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
201.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
200.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
199.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
198.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
198.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
197.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
196.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
196.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
196.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
195.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
192.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
191.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
186.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
184.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
184.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
183.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
182.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
180.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
177.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
176.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
176.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
175.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
175.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
174.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
171.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
170.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
168.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
164.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
163.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
162.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
161.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
161.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
160.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
158.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
155.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
153.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
147.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
138.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
138.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
132.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
129.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
112.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.