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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 248.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 323.2
Min RPKM: 31.5
Std RPKM: 71.0
Median RPKM: 192.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
323.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
316.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
308.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
296.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
291.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
289.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
286.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
284.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
279.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
274.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
272.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
271.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
270.6
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
265.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
265.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
265.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
262.7
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
259.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
256.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
254.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
253.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
252.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
251.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
249.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
248.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
247.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
242.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
240.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
239.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
236.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
235.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
235.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
234.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
233.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
232.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
227.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
226.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
225.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
223.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
221.8
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
218.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
217.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
216.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
213.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
213.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
212.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
211.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
210.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
209.7
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
203.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
202.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
202.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
202.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
201.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
198.1
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
192.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
192.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
191.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
190.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
188.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
186.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
184.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
183.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
175.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
174.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
174.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
171.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
170.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
169.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
165.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
164.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
161.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
158.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
156.3
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
155.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
153.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
149.3
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
137.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
137.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
133.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
132.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
129.5
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
127.5
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
126.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
125.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
123.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
118.0
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
116.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
115.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
113.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
113.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
112.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
106.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
103.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
101.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
99.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
99.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
98.7
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
97.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
97.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
92.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
91.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
83.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
82.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
81.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
75.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
70.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
68.7
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
67.9
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
57.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
47.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
46.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
36.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
31.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 183.8
Samples: 108
Max RPKM: 396.5
Min RPKM: 21.2
Std RPKM: 83.8
Median RPKM: 201.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
396.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
326.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
326.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
322.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
309.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
298.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
297.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
297.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
288.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
288.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
285.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
280.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
275.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
275.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
272.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
269.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
268.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
266.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
266.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
264.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
264.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
260.0
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
258.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
254.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
252.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
245.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
245.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
245.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
244.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
242.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
242.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
241.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
239.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
239.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
236.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
235.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
232.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
228.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
224.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
224.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
224.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
222.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
219.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
218.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
218.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
215.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
214.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
211.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
207.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
207.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
206.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
206.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
202.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
202.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
201.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
196.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
186.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
186.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
180.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
179.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
174.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
171.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
169.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
168.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
164.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
161.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
161.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
160.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
158.2
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
157.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
153.1
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
151.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
150.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
150.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
150.5
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
149.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
144.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
135.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
133.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
132.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
109.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
108.0
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
104.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
100.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
98.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
97.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
92.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
90.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
87.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
83.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
79.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
77.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
74.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
73.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
67.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
66.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
59.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
52.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
51.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
47.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
47.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
46.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
46.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
41.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
34.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
29.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
22.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
21.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.